Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2099 |
Symbol | |
ID | 6161419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2294636 |
End bp | 2295547 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641664868 |
Product | hypothetical protein |
Protein accession | YP_001791131 |
Protein GI | 171058782 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCG TCATGGACAA GACCAAACCC GCCCTGACAG ATCGCAATTT CCCGACGGCT GAAGAGGAAG TTCAGGCCCA GGCTGCTCCT TCTCGCTACG GCGGCAAGGG CAGCGCCTAC AGCCTGGCGT TTACCGACAG CGAATTCCTG CTGCGCGAGG AACTTCGGCC CGTGCGCATG CAACTCGAGC TGCTCAAGCC CGAGATGATC CAGCAGGAAC TGGGCATCGA GTCGACCATC GTGATCTTCG GCAGCGCGCG CATCCTGCCG CCGGAGGTGG CCGCCCAGCG CCTGTCGGAG GCCGGCACCG ATGCCCGCGC CGTGCGGGCG GCACAGATGC AGGTGCAGAT GAGCCGCTAC TACGACGAGG CGCGGCGCTT TGCAGCCATC GTGACCGAGC GCTCGTGCAC GCTGGACACG CCGATCTACG TGGTCACCGG CGGTGGCCCC GGCATCATGG AGGCCGGCAA CCGGGGAGCC CACGAAGTCG GCGGCAAGAG CATCGGATTG AACATCGTGC TGCCGCACGA GCAGGAGCCC AATCCGTACA TCACGCCCGA GCTGTGCTTC CAGTTCCACT ACTTTGCGCT GCGCAAGATG CACTTCGTGA TGCGCAGCAT CGCGCTGGTG TGTTTCCCAG GCGGCTTCGG CACGCTCGAC GAGCTGTTCG AAACCTTGAC GCTGGTGCAG ACGGGCAAGT CCCGGGCCCG CCCGATCCTG CTTTTCGGGC GCGAGTTCTG GAGTCGCCTG ATCAACTTCG ACCTCCTGAT CGAAACCGGC ATGATCCACG CCGCCGACGT CGGGTTGTTC AAGTTCGTCG AAACGGCCGA AGACGCCTGG TACTGCCTGG CCGAGCACTA CGGCTTCGAC CTCCCCGCGA CGCTGACGGG CCCCTTCGCC GAGGACATCT GA
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Protein sequence | MLRVMDKTKP ALTDRNFPTA EEEVQAQAAP SRYGGKGSAY SLAFTDSEFL LREELRPVRM QLELLKPEMI QQELGIESTI VIFGSARILP PEVAAQRLSE AGTDARAVRA AQMQVQMSRY YDEARRFAAI VTERSCTLDT PIYVVTGGGP GIMEAGNRGA HEVGGKSIGL NIVLPHEQEP NPYITPELCF QFHYFALRKM HFVMRSIALV CFPGGFGTLD ELFETLTLVQ TGKSRARPIL LFGREFWSRL INFDLLIETG MIHAADVGLF KFVETAEDAW YCLAEHYGFD LPATLTGPFA EDI
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