Gene Lcho_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2099 
Symbol 
ID6161419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2294636 
End bp2295547 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content65% 
IMG OID641664868 
Producthypothetical protein 
Protein accessionYP_001791131 
Protein GI171058782 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCG TCATGGACAA GACCAAACCC GCCCTGACAG ATCGCAATTT CCCGACGGCT 
GAAGAGGAAG TTCAGGCCCA GGCTGCTCCT TCTCGCTACG GCGGCAAGGG CAGCGCCTAC
AGCCTGGCGT TTACCGACAG CGAATTCCTG CTGCGCGAGG AACTTCGGCC CGTGCGCATG
CAACTCGAGC TGCTCAAGCC CGAGATGATC CAGCAGGAAC TGGGCATCGA GTCGACCATC
GTGATCTTCG GCAGCGCGCG CATCCTGCCG CCGGAGGTGG CCGCCCAGCG CCTGTCGGAG
GCCGGCACCG ATGCCCGCGC CGTGCGGGCG GCACAGATGC AGGTGCAGAT GAGCCGCTAC
TACGACGAGG CGCGGCGCTT TGCAGCCATC GTGACCGAGC GCTCGTGCAC GCTGGACACG
CCGATCTACG TGGTCACCGG CGGTGGCCCC GGCATCATGG AGGCCGGCAA CCGGGGAGCC
CACGAAGTCG GCGGCAAGAG CATCGGATTG AACATCGTGC TGCCGCACGA GCAGGAGCCC
AATCCGTACA TCACGCCCGA GCTGTGCTTC CAGTTCCACT ACTTTGCGCT GCGCAAGATG
CACTTCGTGA TGCGCAGCAT CGCGCTGGTG TGTTTCCCAG GCGGCTTCGG CACGCTCGAC
GAGCTGTTCG AAACCTTGAC GCTGGTGCAG ACGGGCAAGT CCCGGGCCCG CCCGATCCTG
CTTTTCGGGC GCGAGTTCTG GAGTCGCCTG ATCAACTTCG ACCTCCTGAT CGAAACCGGC
ATGATCCACG CCGCCGACGT CGGGTTGTTC AAGTTCGTCG AAACGGCCGA AGACGCCTGG
TACTGCCTGG CCGAGCACTA CGGCTTCGAC CTCCCCGCGA CGCTGACGGG CCCCTTCGCC
GAGGACATCT GA
 
Protein sequence
MLRVMDKTKP ALTDRNFPTA EEEVQAQAAP SRYGGKGSAY SLAFTDSEFL LREELRPVRM 
QLELLKPEMI QQELGIESTI VIFGSARILP PEVAAQRLSE AGTDARAVRA AQMQVQMSRY
YDEARRFAAI VTERSCTLDT PIYVVTGGGP GIMEAGNRGA HEVGGKSIGL NIVLPHEQEP
NPYITPELCF QFHYFALRKM HFVMRSIALV CFPGGFGTLD ELFETLTLVQ TGKSRARPIL
LFGREFWSRL INFDLLIETG MIHAADVGLF KFVETAEDAW YCLAEHYGFD LPATLTGPFA
EDI