| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2085 |
|---|
| Symbol | fabG |
|---|
| ID | 6162350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 2274131 |
|---|
| End bp | 2274868 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641664854 |
|---|
| Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
|---|
| Protein accession | YP_001791117 |
|---|
| Protein GI | 171058768 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.514176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGA AGATTGCTTA CGTCACCGGC GGCATGGGTG GCATCGGTAC CGCCATCTGC
CGTCGCCTTC ACAAGGACGG CTTCAAGGTG ATCGCCGGTT GTGGCCCGAG CCGCGACTTC
AAGAAGTGGC TCGACGAGCA GGCCGCCGAG GGCTACACCT TCTACGCATC GGTCGGCAAC
GTGTCCGACT GGGCGTCGAC GGTCGAGGCC TTCGCCAAGG CCAAGGCCGA GCACGGCCCG
ATCGACGTGC TGGTCAACAA CGCCGGCATC ACCAAGGACC GCATGTTCCT GAAGATGACG
CCGGAAGACT GGCACGCGGT CATCGACACC AACCTGAACT CGATGTTCAA CGTGACCAAG
CAGGTCGTGC CCGACATGGT CGAGCGCGGC TTCGGTCGCA TCGTCCAGAT CAGCTCGGTC
AACGGTGAAA AGGGCCAGGC CGGCCAGACC AACTACTCGG CGGCCAAGGC CGGCATGCAC
GGCTTCACGA TGGCCCTGGC GCAGGAACTG GCGGCCAAGG GCGTGACGGT CAACACCGTG
AGCCCGGGTT ACATCGGCAC CGACATGGTC CGTGCGATCA AGCCCGAAGT GCTGGAGAAG
ATCGTCGCCA CGATCCCGGT CAAGCGCCTG GGCGCACCCG AGGAAATCGG TTCGATCGTC
GCTTGGCTGG CGGGTGAGGA CTCCGGTTTC ACCACCGGCG CCGACTTCAG CTGCAACGGC
GGCCTGCACA TGGGCTGA
|
|---|
| Protein sequence | MTQKIAYVTG GMGGIGTAIC RRLHKDGFKV IAGCGPSRDF KKWLDEQAAE GYTFYASVGN
VSDWASTVEA FAKAKAEHGP IDVLVNNAGI TKDRMFLKMT PEDWHAVIDT NLNSMFNVTK
QVVPDMVERG FGRIVQISSV NGEKGQAGQT NYSAAKAGMH GFTMALAQEL AAKGVTVNTV
SPGYIGTDMV RAIKPEVLEK IVATIPVKRL GAPEEIGSIV AWLAGEDSGF TTGADFSCNG
GLHMG
|
|---|
| |