| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2084 |
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| Symbol | |
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| ID | 6162349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2272954 |
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| End bp | 2274033 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664853 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_001791116 |
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| Protein GI | 171058767 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.441545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGGCG AAAATGCCCT GATGCCCTTG CAACGACTCA GTGCCCTGGA ATCAATCCAG
GCGATCGATA CCTTCGACGC CATCATCGAT GCCCGGTCCC CGGCTGAATA TGCCGAAGAC
CATCTGCCGG GCGCCGTCAA CTGGCCCGTG CTCGACAACG ACGAGCGTGC CATCGTCGGC
ACGATCTACA AGCAAGTCTC CGCCTTCGAG GCCCGCAAGC GTGGCGCAGC CATGGTGGCG
CGACGTGTGG CCGATCACCT CGACCGCTGG ACCGCCGATC TGGAGCGCGG TTGGCGACCG
CTGGTCTACT GCTGGCGCGG CGGCGATCGC TCCGGCACGC TGGCGTGGTT TCTCGACCGT
GTCGGCTTCC GGACGACCCT GGTCGAGGGG GGCTACAAGG CCTACCGCGC CGTGGTGCGC
GATCAGCTGC AGACCCTGCC GGCCCAGTTC GACTGGCAGG TGCTGTGCGG CAAGACCGGT
TGCGGCAAGA CCCGCCTGCT GCATGCGCTG AAGGACGCCG GCTCACAGGT GCTCGACCTG
GAAGCGATCG CCTCGCACCG TGGCTCGGTG CTGGGCCTGC CGCCGGGTGT CGTGCAACCC
AGCCAGAAGC GACTCGACAC GCTGGTCTGG CAGGCGCTGC GCCAGTTCGA CCGCACGCGT
CCGGTGTTCG TCGAAGGTGA AAGCAAGAAA CTGGGTCAGC GCTGGCTGCC CGAGCAGCTG
ATCGAGCGCA TCCGCAGCCA TGCGCGCTGC GTGCACGTCG AGATGCCCGA CGCCGCGCGA
TTGAAGCTGC TGCTCGAGGA CTACGCCTTC CTGAAGGACG ACCCGGCCTT CTTCTGCAGG
CAGCTCGACT CCCTGGTCGA GTTGCGCGGG CGCGAACAGG TCAAGCAATG GCAGGAAGCG
ACGCGCTCGG GTGGCACCGC GCAGGTGTTT GCCGAGTTGA TGGCCCTGCA CTACGACCCC
GGCTACCTGC GCTCGATCGC GCATCAGTTC AAGGGCTGGG AGAACGCCCG GCGTCTTGAA
CTGGCAGACG GCAGCGAGGC CAGCCTGAAG GCGGCGGCGA TGGCGTTGTT GCGATCCTGA
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| Protein sequence | MLGENALMPL QRLSALESIQ AIDTFDAIID ARSPAEYAED HLPGAVNWPV LDNDERAIVG
TIYKQVSAFE ARKRGAAMVA RRVADHLDRW TADLERGWRP LVYCWRGGDR SGTLAWFLDR
VGFRTTLVEG GYKAYRAVVR DQLQTLPAQF DWQVLCGKTG CGKTRLLHAL KDAGSQVLDL
EAIASHRGSV LGLPPGVVQP SQKRLDTLVW QALRQFDRTR PVFVEGESKK LGQRWLPEQL
IERIRSHARC VHVEMPDAAR LKLLLEDYAF LKDDPAFFCR QLDSLVELRG REQVKQWQEA
TRSGGTAQVF AELMALHYDP GYLRSIAHQF KGWENARRLE LADGSEASLK AAAMALLRS
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