| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2081 |
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| Symbol | |
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| ID | 6162346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2270698 |
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| End bp | 2271627 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664850 |
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| Product | asparaginase |
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| Protein accession | YP_001791113 |
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| Protein GI | 171058764 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.438459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGTGC TGGGAACCGG AGGAACCATT GCCGGACGGG CCCCCTCCGC GGGGGACAAC
GTCGGCTACA CCGCCGCTCA GTTGGGGGTC GCGCAACTGG TCGATGCGGT GCCGGGGCTG
CGGCGCTGGG TCGAGCAGGG CCTGATGCTC GATTCCGAGC AGGTCGCGCA GGTCGACAGC
AAGGACATGA GCCACGCGGT GTGGCGTCGG CTCGCCGAGC GAGTGGCCAC GCACGTCGCT
CGGCCGGACG TCAGCGGTGT GGTCGTCACG CACGGCACCG ACACGCTCGA GGAAACCGCC
TACCTGCTGC ATCGGGTGCT GGCACCGCAC AAGCCGGTGG TGCTGACGGC TGCCATGCGC
CCGGCCAGTT CGTCGCAGGC CGATGGTCCG CAGAATCTGT GCGATGCCGT CGGCCTGGCG
ATGCACGTTC AGGCACATGG CGTGCTGCTC GCGATGGGCG GCGTCGTGTG GTCCGGCGCC
GAGGCTCGCA AGGTCCATCC GTATCGGCTG GATGCGTTCT CGGCCGGTGA CGCCGGCGCA
CTGGCCTACA TCGAGGAAGG CCGATTGCGG ATCCTGCGGG GCTGGCCACA GGCGACGCCG
TTGGGCGTGC AGGTGCTGGG GCCGGAAATC TGGCCCGAGG TTCAGATCGT GCACAGCCAC
GCGGGCTCCG ACGGGCGCCT GGTCGAACTG TTGCTCGAAG CGGGGGTGCA GGGGCTGGTG
GTGGCCTGCA CCGGCAACGG CACCATCCAC CATGACCTGA TGGCCGTGCT GATGCGTGCG
CAGCAGTGCG GGGTGAGCGT GCTCAGGGCC CTGCGCCAGG GGGGCGGCGT GCTCGTGCCC
GGCGGGCACG ACGAACTGCC GGCTGCCGGT GGCCTGACAC CCGCCCAGGC CCGCGTCGAG
TTGCTGCTGC GCCTGCTGAT CCAGCGCTGA
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| Protein sequence | MVVLGTGGTI AGRAPSAGDN VGYTAAQLGV AQLVDAVPGL RRWVEQGLML DSEQVAQVDS
KDMSHAVWRR LAERVATHVA RPDVSGVVVT HGTDTLEETA YLLHRVLAPH KPVVLTAAMR
PASSSQADGP QNLCDAVGLA MHVQAHGVLL AMGGVVWSGA EARKVHPYRL DAFSAGDAGA
LAYIEEGRLR ILRGWPQATP LGVQVLGPEI WPEVQIVHSH AGSDGRLVEL LLEAGVQGLV
VACTGNGTIH HDLMAVLMRA QQCGVSVLRA LRQGGGVLVP GGHDELPAAG GLTPAQARVE
LLLRLLIQR
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