Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2080 |
Symbol | |
ID | 6162458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2270242 |
End bp | 2270667 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641664849 |
Product | OsmC family protein |
Protein accession | YP_001791112 |
Protein GI | 171058763 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | [TIGR03561] peroxiredoxin, Ohr subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.378208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTTC CGACCGTGCT CTACACCGCC CACGCCACCT CGACCGGAGG ACGTGCCGGC ACGTCCGTCA GCAGCGACGA GCGCCTCCGT GTCACCTTGT CGGTGCCCAA GGGCCTGGGT GGCGACGACG GTCCGGGCAC CAACCCGGAG CAGCTGTTTG CAGCGGGTTA TTCGGCCTGT TTTCTGGGCG CGCTGAAGTT CGTGGCGGGC CAGAAGAAGA TCGCGATCCC GGCTGAAACC ACCATCACGG CGGACATCTC GATCGGCCCG ATCCCGACCG GCTTCGGCAT CCAGGCTGCG CTGACCATCC ACGTGCCGGG CGTCGACCGT GCCACGGTCG AGGAACTGGT GCAGGCCGCT CACATCGTCT GCCCCTACTC GAACGCCACG CGCGGCAACA TCGACGTCGC GCTGACGGTG GCCTGA
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Protein sequence | MALPTVLYTA HATSTGGRAG TSVSSDERLR VTLSVPKGLG GDDGPGTNPE QLFAAGYSAC FLGALKFVAG QKKIAIPAET TITADISIGP IPTGFGIQAA LTIHVPGVDR ATVEELVQAA HIVCPYSNAT RGNIDVALTV A
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