| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2077 |
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| Symbol | |
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| ID | 6162455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2265513 |
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| End bp | 2266685 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664846 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001791109 |
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| Protein GI | 171058760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0554951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTGC CGATCCGCCC CGAGCCCGTG CGCTCGCACA TGCGTCTTGC CGAAAGCCCG
ACCTGGCCGA TCCCCGGCCG CCGCGCGATC CGGGCCGCGT TCATCGCCTT CCTGATCGCC
GCCGTGAGCG GCGCCCTGCT CGCCGGCCCG GCCGAGGCGA ACACGCGCCC GCACAAATCC
AGGCGGACGG CCGTCAAGCC GCAGCCGGTG ACGCCGCCGT ACGGCCTGCG CGACGACGTG
CAGGACTACA TCCGCCAGGT CACGCAAGCC CATCCGGACT GGCCGGCCGA CTGGGTCGCC
ACGACCATCG GGCAGGCCCG CCACCTGCCG CAGGTGACGC GGCTGATCAT GCCGCCGCCC
ACCGGCACGG CCAAGAACTG GGCGGCCTAC CGGGCGCGCT TCGTCGAGCC GCAGCGCATC
ACGGCCGGCA TGGCGTTCTG GAGTCAGCAC GCCGATGCGC TGGCGCGCGC CGAAGCCACC
TACGGCGTGC CGGCGGCGGT GATCGTGGGC ATCGTCGGCG TCGAGACCTA TTACGGCCGC
CACACCGGCC GGCTGCGCAC GGTCGACGCG CTGGCCAGCC TGGCGTTCGA CTTTCCGAGC
GGGCGCAGCG ACCGCAGCGC CTTCTTCCGC AGCGAACTCA CGGCCCTGCT CGAACTGGCG
CTGCGCGACG GGCTCGACCT CGGAACGCTG CGAGGCAGCT ACGCCGGCGC GCTGGGCTGG
CCGCAGTTCA TGCCGAGCTC GTGGCTCAGG CACGCGGTCG ATTTCGACGG CGACGGCCGC
ATCGCGCTGC ACGACAGCCC GGTCGACGCG ATCGGCAGCA TCGGCAGATT CCTGGCCGCG
CACGGCTGGC AGCGCGGCTT GGCCGTCGCC TACGGCGTGT CGCCGCCGGA CGACGAGGCG
GCGCTCGCCA CGTTGCTGGC GCCCGACATC CGACCGAGCT TCAGCGCCGC GCAGATGGGC
CAGCTCGGCG CCGCGCTCGA CGAGGATGCG CTCGTGCACC CCGGCCCGCT CGCGCTGGTG
CAACTGCACA ACGGCGCAGA GGCGCCGAGC TACGTTGCCG GCACCGAGAA CTTCTGGTCG
CTGACGCGCT ACAACTGGTC GTCGTACTAC GCGATGGCGG TGATCGAACT CGGCCAGGCG
GTGGCCGCAC AACGCCCTGC GTCGCCGCGC TGA
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| Protein sequence | MFLPIRPEPV RSHMRLAESP TWPIPGRRAI RAAFIAFLIA AVSGALLAGP AEANTRPHKS
RRTAVKPQPV TPPYGLRDDV QDYIRQVTQA HPDWPADWVA TTIGQARHLP QVTRLIMPPP
TGTAKNWAAY RARFVEPQRI TAGMAFWSQH ADALARAEAT YGVPAAVIVG IVGVETYYGR
HTGRLRTVDA LASLAFDFPS GRSDRSAFFR SELTALLELA LRDGLDLGTL RGSYAGALGW
PQFMPSSWLR HAVDFDGDGR IALHDSPVDA IGSIGRFLAA HGWQRGLAVA YGVSPPDDEA
ALATLLAPDI RPSFSAAQMG QLGAALDEDA LVHPGPLALV QLHNGAEAPS YVAGTENFWS
LTRYNWSSYY AMAVIELGQA VAAQRPASPR
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