| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2074 |
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| Symbol | |
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| ID | 6163533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2260274 |
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| End bp | 2262829 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664843 |
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| Product | cellulose synthase catalytic subunit (UDP-forming) |
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| Protein accession | YP_001791106 |
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| Protein GI | 171058757 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03030] cellulose synthase catalytic subunit (UDP-forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00117209 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCGAG GCATGGTGAA GCGCTGGGCC GGCGCACTTC AGGTCGAAAG GCCGGACAGC
TGGACGTGCT GGCTGCTGCG CCTGTTCGTG CTGCCGCCGG CGAGCCTGCC GGAGGCCGAA
CTCGTCGCCC CGGTGCCGTT GCCACCGCCG CGACCGGTGC CCGAGCGCGC CATCCGCCGC
CGGCCCTTGC CGGTCAGCCG TCGCATGCCG CTGGGGCCGC CCGAAACCGG CCAGGTGTTC
GACAACCCTT CGCTCGGCAG CGCCGCCGCC GCCGGGCCGG CCCCCGCGCC ACCGGCAGAG
CCGCCGACCG AACCGCGCCC GCGCTGGCGC GCGCCCTTCG ACGCGTTCTA TCGGCGCTGG
CGTGCCTTCG ACTTCGCGCC CTGGGGCCAC CGGATGGAGC ACTGGGCCGA AGCCCCGCTG
TGGCAGCGCC GCGTGGTGCG CAGCGCGCTG ATCGTCGTCG GCACCGCCGC GTTCTGGATG
GCCGCCACCA CGCCGATGAG CGAGCTGGCG CAGGCGGTGT TCTTCCTGGC GATGCTCGGC
CTGGTGCTGG TGGTGCGGCG CATCCCCGGC AACATGCCCA CGCTGGTGCT GATCGGGCTG
GCGCTGCTGG CGTCGTTCCG CTACGGCTGG TGGCGGGTCA CGCAGTCGAT GGACCTCGCG
CCCGGCTGGG AATCCCTGCT CGGCGGCGGT CTGCTGTGCG CCGAGCTGTA CGCCTGGCTG
ATCATGGTGC TGGGCTTCGT GCAGACCTCG CGCCCGCTCA AGCGACCGGT GGCGCCGATC
GAACTGCCAC GTGATCAGTG GCCCACGGTC GACGTCTACA TCCCCACCTA CAACGAGCCG
CTCAGCGTGA TCGGGCCGAC CGTGCTGGCC GCACGCGACC TCGACTGGCC GGCCGACCGG
CTGGTGGTGC ACGTGCTCGA CGACGGCCAC CGCCCCGAGG TGCGCGCCTA CGCCGAGGCG
GCCGGTGTCA ACTACATCTC GCGCGACAAC AACCGCCACG CCAAGGCCGG CAACCTGAAC
AACGCGCTGG CCGAGACCGG CGGCGAGTAC ATCGCGATCT TCGATTGCGA CCACATGCCG
GCGCGCGGTT TCCTGGTCAA CACGATGGGC TGGATGCTGC GCGACAGCAA CTGCGCGATG
GTGCAGACGC CGCACCACTT CTTCTCGGCC GATCCGTTCG AGCGCAACCT CGACACCTTC
CGCCGCGTGC CCAACGAGGG CGTGCTGTTC TACGGCCTGG TGCAGGACGG CAACGACGTC
TGGAACGCCA GCTTCTTCTG CGGCTCGTGT GCGGTACTGC GCCGCAGCGC GCTCGAGCAG
ATCGGCGGCA TCGCCACCGA GACCGTCACC GAAGACGCCC ACACCGCCCT CAAGCTGCAC
CGCAAGGGCT GGCGCACCGC CTACCTGAAC GTCACCCACG CGGCCGGGCT GGCCACCGAA
AGCCTGTCGG GCCACGTGCG CCAGCGCATC CGCTGGGCGC GCGGCATGGC GCAGATCTTC
CGGCTCGACA ACCCCTTGCT CGGCCGCGGC CTGACCGTGA TGCAGCGCCT GTGCTACGCC
AACGCGATGC TGCATTTCTT CTACGGGCTG CCGCGGCTGA TCTTCCTGAC CGCGCCGCTG
GGCTACCTGT ACTTCGAATT TCACATCATC CATGCGTCGG TGGGTGTGCT GCTGCTCTAC
CTGCTGCCGC ACCTGGTGCT GCCGCACATC GCCAATGCCC ACATCGCCGG CCCGCATCGG
CACACCTTCT GGTCCGAGCT CTACGAGACC GTGCTGGCCT GGTACGTGGC GGTGCCCACC
ACCGTGGCGC TGTTCAATCC GAGCGCGGGC AAGTTCGACG TCACCGCCAA GGGCGGGCTG
GTCGAGGAAA CCCACCTCGA CTGGAACATC TCGCGGCCGT ACTTCTTCCT GGTGATCCTC
AACGCGATCG GCGCGGTGTT CGGCATCTTC CGGCTGTTCT GGGATCCGCA GGAGTGGGGC
ACGATCACGC TCAACATGGC GTGGACGATC TACAACCTGC TGGCGCTCGG CGCGGCCATC
GGCGTGGCGC GCGAGAAGCG CCAGGTGCGC CGCACCACCC GCGTCACCAG CCGCCTGCCG
GCCAGCCTGC TGCTGACCGA CGGCCAGCAG ATCAACTGCG AGACCGAGGA CTACGCGCTC
GCCGGCGTCG GCCTGCAGGG CCTGCCGCCG TCGCTCGAGC TGCCCGCGGG CAGCTGGGTG
GCGGTGCGGC TGTTCGACGA AGGCACGCCG CACCTGTTCC CGGCCCGCGT CGTCAGCTGC
CGCAACGGCC GCATGGCGCT GAGCTTCGAG CGGCTCAGCC TCGACCAGCA GGCCGCGCTG
ATCCGCTGCA CCTTCACGCG CAAGGACGCC TGGCAGAACT GGCAGCTGCA TCCGCAGAGC
GACCGGGCGA TGCAGGGCCT GTTCGAGATC GCGCGGCTGG GCCTGCACAG CTACGGTGAA
CTGCTGATGG ACGGCATGCG CTCGGTCAAG AACCACTCGC TGGCGCTGCC CGGCTGGGTG
CTGCGCCGCT GGGCGCACCA CACCCGCATC CATTGA
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| Protein sequence | MTRGMVKRWA GALQVERPDS WTCWLLRLFV LPPASLPEAE LVAPVPLPPP RPVPERAIRR
RPLPVSRRMP LGPPETGQVF DNPSLGSAAA AGPAPAPPAE PPTEPRPRWR APFDAFYRRW
RAFDFAPWGH RMEHWAEAPL WQRRVVRSAL IVVGTAAFWM AATTPMSELA QAVFFLAMLG
LVLVVRRIPG NMPTLVLIGL ALLASFRYGW WRVTQSMDLA PGWESLLGGG LLCAELYAWL
IMVLGFVQTS RPLKRPVAPI ELPRDQWPTV DVYIPTYNEP LSVIGPTVLA ARDLDWPADR
LVVHVLDDGH RPEVRAYAEA AGVNYISRDN NRHAKAGNLN NALAETGGEY IAIFDCDHMP
ARGFLVNTMG WMLRDSNCAM VQTPHHFFSA DPFERNLDTF RRVPNEGVLF YGLVQDGNDV
WNASFFCGSC AVLRRSALEQ IGGIATETVT EDAHTALKLH RKGWRTAYLN VTHAAGLATE
SLSGHVRQRI RWARGMAQIF RLDNPLLGRG LTVMQRLCYA NAMLHFFYGL PRLIFLTAPL
GYLYFEFHII HASVGVLLLY LLPHLVLPHI ANAHIAGPHR HTFWSELYET VLAWYVAVPT
TVALFNPSAG KFDVTAKGGL VEETHLDWNI SRPYFFLVIL NAIGAVFGIF RLFWDPQEWG
TITLNMAWTI YNLLALGAAI GVAREKRQVR RTTRVTSRLP ASLLLTDGQQ INCETEDYAL
AGVGLQGLPP SLELPAGSWV AVRLFDEGTP HLFPARVVSC RNGRMALSFE RLSLDQQAAL
IRCTFTRKDA WQNWQLHPQS DRAMQGLFEI ARLGLHSYGE LLMDGMRSVK NHSLALPGWV
LRRWAHHTRI H
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