| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2071 |
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| Symbol | |
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| ID | 6163530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2253814 |
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| End bp | 2254953 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641664840 |
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| Product | endo-1,4-D-glucanase |
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| Protein accession | YP_001791103 |
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| Protein GI | 171058754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3405] Endoglucanase Y |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000124631 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCACGC GGGCGCAGTC TGCCAACCCC TGCAGCGCCG TCGAGGGCCC GACCGGCTGG
CCGGCATGGC AGACCCTGCG CCGGACCCTG ATGAGCCGCG ACGGCCGTGT CATCGACCGC
TACGCGAGCG ACGCCACCAC CTCCGAAGGC CAGGCCTACG GCCTGTTCTT CGCGCTGGTG
GACAACGACC GCGCGGCCTT CGAGCTGCTG TTGCGCTGGA CCGAAGACAA CCTGGCGGCC
GGCGACCTGG CCGCGCGCCT GCCGGCCTGG CGCTGGGGCC GGCGCGCGGA CGGCAGCTGG
AACGTGATCG ACGCCAACTC CGCCGCCGAC GCCGACCTGT GGCTGTCCTA CGTGCTGTCC
GAGGCCGGCC GGCTCTGGAA GAACCGCCGC TACGACGCGC TCGGGCGGGT GCTGGCGCGC
CGCATCGCCG CCGAAGAGGT GATCGAGCTG CCCGGCCTCG GCACCACCCT GCTGCCCGGG
CCGCAGGGAT TTCGCCGCGG CGAACGCGGC GCCAAGCTCA ACCCGAGCTA CCTGCCGCCG
CAGCTGCTGC GCTGGTTCGC GCGCAACCGC ACCGAGTCCG TCTGGGTGCC CCTGCGCGAC
GCCTCGCTGC GCCTGCTGCA CGACAGCGCG CCCCACGGCC TGGCGCCCGA CTGGACCGTG
TTCGACGCCG ACCGGGGCTG GAGCCTGGCC GAACTGGCCG ACGACGAGCG CAGCGGCAGC
TACAACGCGA TCCGGGTCTA CCTCTGGCTC GGCCTGACCG ATCCGGGCGA TCCGGCGCGC
GGGCGCCTGC TCGCCCGCTA TGCGCCGATG GCGCGGCTGT CCGAACTGCT CGGCGGCGTG
CCCGAGAAGG TCGATCCGGC GCGCCCCGCA CTCGAGCAGT CGGCCGGCGC GCAAGCCAAC
GGGCCGGTCG GTTTCCAGGC CGCCATGCTG CCGTTCGCCG ACGCGCTCGG CCAGACCGCG
CTGAGCGAGC GTCTGGCCGA CCGCGTGGCC ACGCAGGGCG TGCAGCCGGA CGCCTATTAC
GACCAGGTGC TGAGCCTGTT CGCGCTCGGC TTCCGCGAGC GGCGCTACCG CTTCGCCGCC
GACGGATCGC TGCAACCGGG ATGGGCCTCA TGCGACGCAC CGCCTGGATC CTCGCGCTGA
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| Protein sequence | MATRAQSANP CSAVEGPTGW PAWQTLRRTL MSRDGRVIDR YASDATTSEG QAYGLFFALV
DNDRAAFELL LRWTEDNLAA GDLAARLPAW RWGRRADGSW NVIDANSAAD ADLWLSYVLS
EAGRLWKNRR YDALGRVLAR RIAAEEVIEL PGLGTTLLPG PQGFRRGERG AKLNPSYLPP
QLLRWFARNR TESVWVPLRD ASLRLLHDSA PHGLAPDWTV FDADRGWSLA ELADDERSGS
YNAIRVYLWL GLTDPGDPAR GRLLARYAPM ARLSELLGGV PEKVDPARPA LEQSAGAQAN
GPVGFQAAML PFADALGQTA LSERLADRVA TQGVQPDAYY DQVLSLFALG FRERRYRFAA
DGSLQPGWAS CDAPPGSSR
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