| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2070 |
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| Symbol | |
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| ID | 6163529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2251478 |
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| End bp | 2253766 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664839 |
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| Product | cellulose synthase regulator protein |
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| Protein accession | YP_001791102 |
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| Protein GI | 171058753 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00029094 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCACAC CCTCCACCAT GCAGCATCGA AACGCCAGCA GTTTTCACGC GTTTGTCGCA
GCTGTCCTGC TCGGCGGCAT CCCTCTGCAA GGCGGTTCCG CCCCGGCGCC GACCGATGCC
GTCGCCGCGG TTGCGGCGGC GCCCGCCGAC ACGAGCACAC GCATCCAGAC CCTCAGTCTG
CGAGACCTCG GCGCCCAGCG CCCGATCGAA CTGCGCGGCA TCGATCACAG CGTCTACCTG
CCGCTGTCGG TGCGCCTCGA CGAAACCGTG ACGCGGGCGC GTCTGAAGCT CAACTACACC
TTTTCTCCCG GCCTGCTGGC CGATCTGTCG CAGCTGAAGG TGTTCGTCAA CGACGAGGTG
CTGGCCACGG TGCCGGCCGT CAAGGGCAAG CTCGGCAGCC CGCAGACGAT CGAGATCGAC
CTGGAACCGC ACTTCTTCAC CGAGTACGCC CAGCTGCGGC TGCAGTTCAT CGGCCACTAC
ACGCTCGATT GCGAATACCC GTTCCACAGC AGCCTGTGGG CCAACATCAG CAACCAGAGC
AGCCTCGAGA TGACGACGCA GCGCCTGCCG CTGCGCAACG ACCTGGCGCT GCTGCCGGCG
CCCTTCTTCG ACGTGCGCGA CGGCACCCGC CTGAAGCTGC CGTTCGTGAT CGCGCCGTCG
CCCTCGCCGG AGGCCCTGCG CAGCGCCGGG GTGCTGGCGA GCTGGTTCGG CGCGCTCGCC
AGCTATCGCG GCGCGCAGTT CCCGGTGTCC GACGCGCTGC CCGCAGGCCA TGCCGTGGTG
ATGGCCACCA ACGACCAGCG CCCGGCCGGC CTCGACCTGC CCCAGGTCGA GGCACCGACG
CTCAAGATCG TGCCGCACCC GTCGGATCCG GGCGCCAAGC TGCTGCTGGT GCTCGGCCGC
GACGCCGCCC AGCTCAAGAC CGCCACCGAC GCGCTGGTGC TGGGCCAGGC GGCCCTCAGC
GGCGACCAGG TGCAGGTCGA CAAGCTCAAC TACCCGGCGC GACTGGCCGC GCACGAGGCG
CCCAACATCG TCAAGACCGG CGGCATCGTG CGCCTGGGCA GCCTGGTGCC GAACGCCGCC
GCGCTGCAGG TGGCGGGCGC GCAGCTGCAG ACCATCCGCC TGCCGCTGCG CCTGCCGGCC
GACACCTTCG CCTGGCAGTC CGAGGGCCTG CCGATCGAGC TGCGCTACCG CTACACGCCG
CCGCACGAGC TGGGCGCGGC GCGGCTGGCG GTGCAGATCA ACGAGCAGCT GGTCGAGTCC
TTCCTGCTGC GCCCGGCCGG CACCCAGGGC ACGCGCAGCC AGCGCATGGT GCTGCCCTTT
CTCGAGATCG GGGGCACCTA CGACCGCCAG GACATCACCG TGCCGGCGTT CCAGCTGGGC
AACAACAACG AACTGCAGTT CCGCTTCGAG ATCCCGCCGG TCGACACCTC GCGCTGCCGC
GAGACGGTGC TGATCTCGCA GGCCGGCATC GACGCCGACT CCACCATCGA CCTGCGCAAC
GTCGAGCACT ACGTCACCCT GCCGAACCTG GCGCTGTTCG CCAACAGCGG TTTCCCGTTC
ACCAAGTTCG CCGACCTGGC CGAGACCGCG CTGATCCTGT CGGACGCACC GGCCGTGGCC
GAGATCGAGG CCGCACTCAA CCTGCTCGGC CAGATGGGTG CGGCCACCGG CATCGCCGGC
ACGCGGCTGC AGGTGCTGCC GGCCAGCCGG GTCAAGGAGG CGGCCGACCG CGACCTGCTG
GTGATCGCCA GCGGCAGCGC ACCGGCGCCG CTGGCCAACT GGTCGCAGCA CCTGCCGGCG
CGACTCGACG CCAGCCGGCG CAGCAACACC TCGCTGACCC GGTTGAGCGA CGCCGGCTCC
GAATGGTTCT CGGGTGCCCT GCCGCGCAAC TTTCCCGACG ACGAGTGGGC CGAGCTGCAG
GCCAAGGGGC CGCTGACGGC GCTGATGGGT TTCGAGTCGC CTCTCAACAG CGGCCGCAGC
GTGGTCGCCC TGCAGGCGAC CGAAGGCGCG TCCCTGCAGC AGGCCGCCGC CACCCTGCTC
GACCCCGGCA AGATCCGCCT GATCCAGGGC GACCTGGTGC TGATGCGCAA CGAGGCGTTC
GAGGCCTTCC GCATCGGCGA GGTCTACCAG GTGGGCGAAC TGCGCTGGTG GCGCTGGGTC
TGGTACCAGA TGCGCGGACA CCCGCTGCTG ATGGTGCTGC TGGTGGGCCT GGTGTCCTTG
TTGCTGGCCC TGCCGCTGTA CCGCGCACTG CGCATGCGGG CCGAACGTCG CGTGCGCAGC
GAGACCTGA
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| Protein sequence | MATPSTMQHR NASSFHAFVA AVLLGGIPLQ GGSAPAPTDA VAAVAAAPAD TSTRIQTLSL
RDLGAQRPIE LRGIDHSVYL PLSVRLDETV TRARLKLNYT FSPGLLADLS QLKVFVNDEV
LATVPAVKGK LGSPQTIEID LEPHFFTEYA QLRLQFIGHY TLDCEYPFHS SLWANISNQS
SLEMTTQRLP LRNDLALLPA PFFDVRDGTR LKLPFVIAPS PSPEALRSAG VLASWFGALA
SYRGAQFPVS DALPAGHAVV MATNDQRPAG LDLPQVEAPT LKIVPHPSDP GAKLLLVLGR
DAAQLKTATD ALVLGQAALS GDQVQVDKLN YPARLAAHEA PNIVKTGGIV RLGSLVPNAA
ALQVAGAQLQ TIRLPLRLPA DTFAWQSEGL PIELRYRYTP PHELGAARLA VQINEQLVES
FLLRPAGTQG TRSQRMVLPF LEIGGTYDRQ DITVPAFQLG NNNELQFRFE IPPVDTSRCR
ETVLISQAGI DADSTIDLRN VEHYVTLPNL ALFANSGFPF TKFADLAETA LILSDAPAVA
EIEAALNLLG QMGAATGIAG TRLQVLPASR VKEAADRDLL VIASGSAPAP LANWSQHLPA
RLDASRRSNT SLTRLSDAGS EWFSGALPRN FPDDEWAELQ AKGPLTALMG FESPLNSGRS
VVALQATEGA SLQQAAATLL DPGKIRLIQG DLVLMRNEAF EAFRIGEVYQ VGELRWWRWV
WYQMRGHPLL MVLLVGLVSL LLALPLYRAL RMRAERRVRS ET
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