| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2064 |
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| Symbol | |
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| ID | 6162828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2243713 |
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| End bp | 2245035 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664833 |
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| Product | chloride channel core |
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| Protein accession | YP_001791096 |
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| Protein GI | 171058747 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0178242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TGCGGCTCCC GGAGCAGGTC GAACTGCTGC CCCATGTCGG GCGCTGGCTC
CTGCTGGCCG GCCTGGTGGC GGTGCTGGCG GGCTCGGCCT CCGCCTTGTT CCTGCTGGCG
CTCGACTGGG TGACCGGCAC CCGCGAGGCG CAGCGCTGGC TGGTCTTCGG CCTGCCGCTG
GCGGGCTTTG CGGTCGGCTG GGTCTACCTG AAGGTGGGCC GCGGCGTCGA GGCGGGCAAC
AACCTGCTGA TCGACGAGAT CCACGATCCG AAGAACGTCG TGCCGCTGCG CATGGCGCCG
CTGATCCTGG CCGGCACCGT GATCTCGCAC CTGTTCGGCG CCTCGGTGGG TCGCGAGGGC
ACCGCCGTGC AGATGGGTGG CGCGCTGGCC GACCAGCTCA CGCACGTCTT CAAGCTGCGC
CCGGAAGACC GCCGCATCCT GCTGATGGCG GGCATCAGCG CCGGTTTCGC GTCGGTGTTC
GGCACGCCGC TGGCCGGCGC GGTGTTCGGG CTCGAGGTGC TGCTGATCGG CCGCCTGCGC
TACGACGCGC TGCTGCCGTG TTTCACCGCC GCGATCGTGG CCGACCAGGT CACGACCGCC
TGGGGCGTGC ACCACACGCA TTACCTGGCC GGCCTGATCC CGGCGGTGTC GGCGTGGACG
CTGACGGCCG TGGTGCTGGC AGGCATCGTG TTCGGGCTGG TCGGCATGCT GTTCGCGCAG
GCGACCCACG CCGGCGCGGC CGTGGTCAGA CGTCATGTCG GCTATCCGCC GTTGCGGCCG
CTGTTCGGCG GGGCGGCCAT CGCCGTGGTG ATCTGGTTCG GCGACGGCTG GCGTTATGCG
GGCCTGGGCA TTCCGGTGAT CGTCGAAGCC TTCGTGCAGC CGGTGCCGTC GTGGGATTTT
GCCGCCAAGC TCGGCCTGAC GGTGGCCTCG CTGGCCAGCG GTTTCAAGGG CGGCGAGGTG
ACGCCGCTGT TCTTCATCGG CGCCACGCTC GGCAACGCGC TGGCGCCGTT GCTGCAACTG
CCGTTGGGCC TGCTGGCGGC GCTCGGTTTC GTCGCCGTGT TCGCCGGCGC GGCCAACACG
CCGCTGGCCT GCACGCTGAT GGCGATGGAG CTGTTCGGTG CGCAGATCGG CGTGTACGCC
GGCCTGGCCT GCGTCGTCAG CTATCTGTTC TCGGGCCACA CCGGCATCTA CCGCTCGCAG
CGGGTCGGCC ACGCCAAGCA TCGCCACACG CCCGAGGGCA TGAAGCTCGG CGACGTGCCG
GCCTACCGCG ACCGGCAGCG CGCCGCGCAG GACGCTGCCG ACGCGCCCCG CCAGGAACCC
TGA
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| Protein sequence | MKRLRLPEQV ELLPHVGRWL LLAGLVAVLA GSASALFLLA LDWVTGTREA QRWLVFGLPL
AGFAVGWVYL KVGRGVEAGN NLLIDEIHDP KNVVPLRMAP LILAGTVISH LFGASVGREG
TAVQMGGALA DQLTHVFKLR PEDRRILLMA GISAGFASVF GTPLAGAVFG LEVLLIGRLR
YDALLPCFTA AIVADQVTTA WGVHHTHYLA GLIPAVSAWT LTAVVLAGIV FGLVGMLFAQ
ATHAGAAVVR RHVGYPPLRP LFGGAAIAVV IWFGDGWRYA GLGIPVIVEA FVQPVPSWDF
AAKLGLTVAS LASGFKGGEV TPLFFIGATL GNALAPLLQL PLGLLAALGF VAVFAGAANT
PLACTLMAME LFGAQIGVYA GLACVVSYLF SGHTGIYRSQ RVGHAKHRHT PEGMKLGDVP
AYRDRQRAAQ DAADAPRQEP
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