| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2063 |
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| Symbol | |
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| ID | 6162827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2242073 |
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| End bp | 2243671 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664832 |
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| Product | GMP synthase, large subunit |
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| Protein accession | YP_001791095 |
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| Protein GI | 171058746 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
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| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0340406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACG ACAAGATCCT GATCCTCGAC TTCGGCTCGC AAGTCACCCA GCTGATCGCA
CGCCGCGTGC GCGAGGCGCA TGTCTACTGC GAGATCCACC CGAACGACGT CAGCGACGAC
TTCATCAAGA CCTTCGCGCC CAAGGCCATC ATCCTCAGCG GCAGCCACGC CAGCACGTAT
GAGGACCACC AGCTGCGCGC GCCGCAAGCC GTGTGGGACG CCGGCGTGCC GGTGCTCGGC
ATCTGCTACG GCATGCAGAC CATGGCCGTG CAGCTGGGCG GCAAGGTCGA GTGGAGCGAC
CACCGCGAGT TCGGCTACGC CGAGGTGCGC GCACGCGGCC ACACGAAGCT GTTCGACGGC
ATCGAGGACT TCGCCACCGC CGAAGGCCAC GGCATGCTCA AGGTCTGGAT GAGCCACGGC
GACAAGGTCA CCGAACTGCC GCCCGGCTTC AAGCTGATGG CCAGCACGCC CAGCTGCCCG
ATCGCCGGCA TGGCCAACGA GGACAAGCGC TACTACGCGG TGCAGTTCCA CCCCGAGGTG
ACGCACACGC TGCAGGGCGC GGCCATGCTG ACGCGCTTCG TGCGCGACAT CGCCGGCTGC
CGCGGCGACT GGATCATGGG CGACTACATC GCCGAAGCCG TGGCGCACAT CCGCGCCCAG
GTCGGCGACG AAGAAGTCAT CCTCGGCCTG TCGGGCGGTG TCGATTCCAG CGTGGCCGCC
GCGCTGATCC ACCGCGCCAT CGGCGACCAG CTCACCTGCG TCTTCGTCGA CCACGGTCTG
CTGCGCCTGA ACGAAGGCGC GATGGTGATG GAGATGTTCG CCGGCCGCCT GCACGCCAAG
GTCGTGCACG TCGAGGCCGC CGAGCAGTTC CTCGGCCACC TGAAGGGCGT GACCGACCCG
GAGCAGAAAC GAAAGATCAT CGGCCGCGAG TTCGTCGAGG TCTTCCAGGC TGAGGCTGCC
AAGCTCAAGG GTGACGGCAA CAAGGGCGCC AAGTGGCTGG CCCAGGGCAC GATCTACCCC
GACGTGGTCG AGAGCGGCGG CACCGCCAGC AAGAAGGCCA CGATCAAGAG CCACCACAAC
GTCGGCGGCC TGCCCGAGAC ACTCGGCCTG AAGCTGCTGG AGCCGCTGCG CGAGCTGTTC
AAGGACGAGG TGCGCGAACT GGGCGTCGCG CTCGGCCTGC CGCACGACAT GGTGTATCGC
CACCCCTTCC CCGGCCCGGG CCTGGGCGTG CGCATCCTGG GTGAGGTCAA GCCTGAGTTC
GCCGAGCTGC TCAAGCGCGC CGACCACATC TTCATCGAGG AGCTGCGCAA GACCGTCGAC
GAGGCCACCG GCAAGACCTG GTACGACCTG ACGAGCCAGG CCTTCACGGT GTTCCTGCCG
GTCAAGAGCG TGGGCGTGAT GGGGGACGGG CGCACCTACG ACTACGTGGT GGCGCTGCGC
GCGGTGCAGA CCAGCGACTT CATGACCGCC GACTGGGCCG AGCTGCCCTA CGCGCTGCTC
AAGAAGGTGT CGAGCCGCAT CATCAACGAG GTGCGTGGCA TCAACCGCGT CACCTACGAC
GTGTCGAGCA AGCCGCCGGC GACGATCGAG TGGGAGTGA
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| Protein sequence | MQHDKILILD FGSQVTQLIA RRVREAHVYC EIHPNDVSDD FIKTFAPKAI ILSGSHASTY
EDHQLRAPQA VWDAGVPVLG ICYGMQTMAV QLGGKVEWSD HREFGYAEVR ARGHTKLFDG
IEDFATAEGH GMLKVWMSHG DKVTELPPGF KLMASTPSCP IAGMANEDKR YYAVQFHPEV
THTLQGAAML TRFVRDIAGC RGDWIMGDYI AEAVAHIRAQ VGDEEVILGL SGGVDSSVAA
ALIHRAIGDQ LTCVFVDHGL LRLNEGAMVM EMFAGRLHAK VVHVEAAEQF LGHLKGVTDP
EQKRKIIGRE FVEVFQAEAA KLKGDGNKGA KWLAQGTIYP DVVESGGTAS KKATIKSHHN
VGGLPETLGL KLLEPLRELF KDEVRELGVA LGLPHDMVYR HPFPGPGLGV RILGEVKPEF
AELLKRADHI FIEELRKTVD EATGKTWYDL TSQAFTVFLP VKSVGVMGDG RTYDYVVALR
AVQTSDFMTA DWAELPYALL KKVSSRIINE VRGINRVTYD VSSKPPATIE WE
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