Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2053 |
Symbol | |
ID | 6160589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2231094 |
End bp | 2232533 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641664822 |
Product | hypothetical protein |
Protein accession | YP_001791085 |
Protein GI | 171058736 |
COG category | [S] Function unknown |
COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000533469 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCTCGC TGTCCTCGAT GTTGCTGATC GTTCTCGCCG TGCTCGGCGG GCTGAACCTG TTTGTGCTGG TTCAGCTGCT GCGCCAGACC GGCTCGGACC AGGATCCCGA CAGCCAATGG CAGTGGCTGC AGACCACCTT GACGGCGCTG CAGCGCGATC AGCACAGTGG CGCCGAGCGC ACCGAGCGTG AACTGCGCGG CGCCGTGCTG GCCGCCGCGC GCGACACCCG GGTCGAACTC GGTGGCGGGC TGGCCGAGTT CCAGCGGCTG CTGATGGCGC AATCGGGCGA GGTGGCGCGC ACGCAGAACG AGCAGATCGA CTCGTTTCGC ATCCAGCTGG CCGCGATGCA GACCGGCCTC GACCAGCGCC TGGCCGGCCT GCAGGGGGGC ATCGAGCAGC GGCTGGTGTC GATGCAGGGC AGCGTCGAGC AGCGCTTGAG CAATCTGCAG GGCGGTGTCG AGCAGCGCCT GGCCAGCCTG CAGGCCGACA ACGAGAAGAA GCTCGACCAG ATGCGCGCCA CGGTCGACGA GAAGCTGCAC GCCACGCTGG AGGCGCGGCT GGGCGAGAGC TTCAAGCAGG TCGCCGAGCG GCTCGAGCAG GTGCACCGCG GCCTGGGTGA GATGCAGACG CTGGCGCAGG GCGTGGGCGA CCTCAAGCGC GTGCTGACCA ACGTGAAGGC GCGCGGCGTG TTCGGCGAGG TGCAGCTCGC CGGCCTGCTG GAGCAGGTGC TGACGCACGA GCAGTACGCC GTCAACGTGG CCACCGTGCC GGGCAGCAAC GAGCGGGTGG AGTTCGCGAT CCGCCTGCCC GGCCGCGCGG TGGGCGGGGC GCCGGATGCG CCGGTCTGGC TGCCGATCGA CGCCAAATTC CCGCGCGAGG ACTACGAACG TTTGCTCGAC GCCCACGACC GCGCCGACCG CGAGGCGGCC GAGGCAGCGG CCAAGGCGCT CGAGCAGCGC ATCCGCGACG AGGCCCGCAG CATCGCCGCC AAATACCTGG CGCCGCCGCA CACCACCGAT TTCGCGATCC TGTTCCTGCC CACCGAGGGC CTGTACGCCG AGCTGCTGCG CCGCCCCGGT CTGACCGAGG CGCTGCAGCG CCAGCACCGC GTCACGCTGG CCGGGCCGAC CACGCTGCTG GCGATGCTCA ACAGCCTGCA GATGGGCTTT CGCACGCTGG CGCTGGAGCA GCGCAGCTCG GAGGTCTGGA GCGTGCTGGG CGCCGTCAAG ACCGAGTTCG CCAAGTTCGG CGACGTGCTG GCCAAGACCA AGAAGAAGCT GCTCGAGGCG CACAACACCA TCGACGACGC CGAGGTGCGC GCGCGCTCGA TGGCGCGCAA GCTCAAGTCG GTGGAGGCGC TGCCCGAGCC CGAGGCGCGC GCGCTGTTGC CGGTCGAGTC CGGCGTGGCG CGGGATGGCG ACGCGGCAAC GGCCGGCTGA
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Protein sequence | MPSLSSMLLI VLAVLGGLNL FVLVQLLRQT GSDQDPDSQW QWLQTTLTAL QRDQHSGAER TERELRGAVL AAARDTRVEL GGGLAEFQRL LMAQSGEVAR TQNEQIDSFR IQLAAMQTGL DQRLAGLQGG IEQRLVSMQG SVEQRLSNLQ GGVEQRLASL QADNEKKLDQ MRATVDEKLH ATLEARLGES FKQVAERLEQ VHRGLGEMQT LAQGVGDLKR VLTNVKARGV FGEVQLAGLL EQVLTHEQYA VNVATVPGSN ERVEFAIRLP GRAVGGAPDA PVWLPIDAKF PREDYERLLD AHDRADREAA EAAAKALEQR IRDEARSIAA KYLAPPHTTD FAILFLPTEG LYAELLRRPG LTEALQRQHR VTLAGPTTLL AMLNSLQMGF RTLALEQRSS EVWSVLGAVK TEFAKFGDVL AKTKKKLLEA HNTIDDAEVR ARSMARKLKS VEALPEPEAR ALLPVESGVA RDGDAATAG
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