Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2045 |
Symbol | |
ID | 6163491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2222122 |
End bp | 2222445 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641664814 |
Product | transcriptional coactivator/pterin dehydratase |
Protein accession | YP_001791077 |
Protein GI | 171058728 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2154] Pterin-4a-carbinolamine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0827962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGA TCATCGGAAC CGACAAGCTC GACGCCCGCC AGGCCGCCGA GCAGCTCACG CTGCTGCCGC ACTGGCAGCA CGACGCCGAG CGCGGTGCGA TCAGCCGCAG CTACCGGTTT GCCGACTTCG TGCAGGCCTT CGCCTTCATG ACGCAGCTGG CGCTGGTGGC CGAGCGCTGC AACCATCACC CGGAATGGTC CAACGTCTAC GACCGGGTCG ACATTGTTCT CACGACCCAC GACCTGGGCG GCCTGTCGCA GCGCGACATC GACCTGGCGC GCTGTGCCGA CGAGGCATTT GCGCGCTTCG CCGCCCCGAC TTGA
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Protein sequence | MDMIIGTDKL DARQAAEQLT LLPHWQHDAE RGAISRSYRF ADFVQAFAFM TQLALVAERC NHHPEWSNVY DRVDIVLTTH DLGGLSQRDI DLARCADEAF ARFAAPT
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