Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2044 |
Symbol | |
ID | 6161952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2220827 |
End bp | 2222122 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641664813 |
Product | fumarylacetoacetase |
Protein accession | YP_001791076 |
Protein GI | 171058727 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0798972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCG ACGACACGCT GGACCCGGCG CTGCGCAGCT GGCTCGAATC GGCCAATGCG GCGGACACCG ACTTCCCGAT CCAGAACCTG CCGTTCGGTC GCTTCCGGCT GGCGGGTGAA ACCGCGAGCG CCTGGCGCAT CGGCGTGGCG ATCGGCGACC AGGTGCTCGA CCTCCGGCGC GCCGGCCTGA TCGAGCATGG CGACATGGCC CGGCTGATGT CCGCCTCCGC CTCCGTTGCC GATCGCCGCG CGCTGCGCCG GGCGATCTCG GCGGGCTTGC GTGAAGGCAG TGCGCAGCGG GCGACGTTCA GCGAGGCGCT GCTGCCGCAG GCCGCGGTGC AGATGGGCCT GCCGTGCGAG ATCGGCGACT ACACCGACTT CTACACCGGC ATCCACCACG CCACCACCGT CGGCAAGCTG TTCCGGCCCG AGGCCCCGCT GCTGCCCAAC TACAAGTGGG TGCCGATCGG CTATCACGGC CGGGCCTCGT CGATCGTGGC GAGCGGCCAG GACTTCCACC GCCCGCTCGG CCAGGTCAAG GCCGCCGATG CCGAGGCGCC GGTGCTGCGC CCGAGCGGCC GGCTCGACTA CGAGCTGGAG CTGGGCATCG TGATGGCGCG GCCCAATGCG CTGGGCGAGC CGGTGCCGAT GGCTGCGGCC GAGGACCACG TGTTCGGTCT CACGCTGCTC AACGATTGGA GCGCACGCGA CCTGCAGGCC TGGGAATACC AGCCGCTCGG GCCCTTCCTG TCGAAGAACT TCGCCAGCAC CGTGTCGCCG TGGATCGTCA CGCTGGAGGC GCTGCAGCCG TTTCGCGCGC CGCCCGAGCG CCCGGCGGGC GATCCGCTGC CGCTGCCGTA TCTGGATTCG CCGTACAACC GCGAAGCCGG CGCGATCGAC ATCACGCTCG AAGTCTGGCT GCAGACCGCC GCGATGCGTC GTGCGGGCCT GGCCGCGCAG CGGCTCAGCA CGTCCAACTA CCGCGACGCC TACTGGACGC TGGCGCAGCT GGTGGCGCAC CACACCGTCA ACGGCTGCAA CCTGCGCAGC GGCGATCTGC TGGGCACCGG CACCTTGTCC GGCCCGCAGC CTGATCAAGC CGGCTCGCTG CTCGAACTGA GCCTGGGCGG CCAGCAGCCG GTCACGCTGG CCAACGGCGA ACAGCGGCGC TTTCTGGAGG ACGGCGACAG CGTGATCCTG CGCGCCTACT GCGAGCGGGA TGGCCACCGG CGCATCGGTT TCGGCGAATG CATCGGCACC GTGCTGCCGG CGCGCCAACT TGAAGGAGCG ACGTGA
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Protein sequence | MSFDDTLDPA LRSWLESANA ADTDFPIQNL PFGRFRLAGE TASAWRIGVA IGDQVLDLRR AGLIEHGDMA RLMSASASVA DRRALRRAIS AGLREGSAQR ATFSEALLPQ AAVQMGLPCE IGDYTDFYTG IHHATTVGKL FRPEAPLLPN YKWVPIGYHG RASSIVASGQ DFHRPLGQVK AADAEAPVLR PSGRLDYELE LGIVMARPNA LGEPVPMAAA EDHVFGLTLL NDWSARDLQA WEYQPLGPFL SKNFASTVSP WIVTLEALQP FRAPPERPAG DPLPLPYLDS PYNREAGAID ITLEVWLQTA AMRRAGLAAQ RLSTSNYRDA YWTLAQLVAH HTVNGCNLRS GDLLGTGTLS GPQPDQAGSL LELSLGGQQP VTLANGEQRR FLEDGDSVIL RAYCERDGHR RIGFGECIGT VLPARQLEGA T
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