Gene Lcho_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2043 
Symbol 
ID6161951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2220279 
End bp2220830 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID641664812 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001791075 
Protein GI171058726 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0836593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG ATCGCATCCA CCACGTCGCC TATCGCTGCC GCGACGCCGA GCAGACCGTG 
CGCTGGTACG GCCAGATGCT GAAGATGGAC TTCGTGCTGG CGATCGCCGA GAACGAGGTG 
CCCTCCACCC GCGCGCCCGA CCCGTACATG CACGTGTTCC TCGATGCCGG CCACGGCAAC 
GTGCTGGCGT TTTTCGAGCT GCCCTCACAG CCGCCGATGG GGCGCGACCC GAACACGCCG 
GAGTGGGTGC AGCACATCGC CTTCAAGGTG GCCGACCGCG CCACGCTGCT CGAATTCAAG 
GCCCATCTGG AAGCCAACGG CGTCGAGGTG CTGGGCGTCA CCGACCACGG TGTCTTCCAC 
TCGATCTACT TCTTCGACCC CAACGGCCAC CGCATCGAGC TGGCCTGCCC GGACCCGGAC 
GAAGCGCCGC AACTCGCCCG GCTCGACGCG GTCAAGTGGG CGATGCTGGA GGAATGGAGC 
CGCACCAAAC GCGCGCCGCG CCACGCCGCG TTCCTGCACG CGCACGCGCT GGCCGCAGAG 
GAGCCCGCAT GA
 
Protein sequence
MKIDRIHHVA YRCRDAEQTV RWYGQMLKMD FVLAIAENEV PSTRAPDPYM HVFLDAGHGN 
VLAFFELPSQ PPMGRDPNTP EWVQHIAFKV ADRATLLEFK AHLEANGVEV LGVTDHGVFH 
SIYFFDPNGH RIELACPDPD EAPQLARLDA VKWAMLEEWS RTKRAPRHAA FLHAHALAAE 
EPA