| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2038 |
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| Symbol | |
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| ID | 6162266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2215071 |
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| End bp | 2216045 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664807 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791070 |
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| Protein GI | 171058721 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0401201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACATT CTTTCTTCCG TCGTGCCACC CTCGGCGCCC TGTCGCTGGC CCTCGCCGCC
GCCTTCACGC CCGCACTCGC CGCCGACAAG TCGGTCGCCG TCACGGCGAT CGTCGAACAC
CCCGCACTCG ACGCGGTGCG TGACGGCGTC AAGGACGAGC TCAGAGCCGC CGGCTTCGAG
GCCGGCAAGA ACCTGAAATA CGCCTACCAG AGCGCACAGG GCAACAGCGG CACCGCCGCG
CAGATCGCCC GCAAGTACAT CGGCGACCGG CCGGACGTGA TCGTCGCCAT CGCCACGCCG
TCGGCCCAGG CGGTGGTGGC CGCCACCCGC GACGTGCCGG TGGTGTTCAG CGCCGTCACC
GACCCGGTGG CCGCCAAGCT GGTCAAGACC TGGAGCGCCT CGGGCAGCAA CGTCACCGGC
GTGTCCGACC TGTCGCCGCT GGACAAGCAC CTGGCGCTGA TCAAGCAGAT CCTGCCGCAG
GCCAGGCGCA TCGGCGTGAT CTACAGCCCG GGCGAAGCCA ACTCGGTGGC GATCGTCGAC
GCACTGAAAA AGGCCGCGCC CGCCGCCGGC CTGACGCTGG TGGAAGCCGC CGCCGCCCGC
ACGGTCGACG TGGCCAGCGC CGCGCAGAGC CTGGTCGGCC GCGCCGACGT GATCTACGCG
CCCACCGACA ACAACGTGAT GTCGGCCTTC GAGGGCATCG TCAAGGTGGC GCAGCAGGCC
AAGCTGCCGG TGATCGCCGC CGACACCGAC GCGGTCAAGC GCGGCGCGGT GGCCGCGCTG
GGCCTGAACT ACTACGACCT CGGCCGCCAG ACCGGCAAGG TGGTGGCGCG CATCCTCAAC
GGCGAGGCCG CCGGCAGCAT CGCCTCGCAG GTCAGCAGCA CCTTCGAGCT GCACGTCAAC
CCGGCCGCAG CCACGCGCCA GGGCGTGACG CTGTCGCAGG CGTTCATCCA GTCGGCCAAG
GTGGTGGTTC GCTGA
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| Protein sequence | MQHSFFRRAT LGALSLALAA AFTPALAADK SVAVTAIVEH PALDAVRDGV KDELRAAGFE
AGKNLKYAYQ SAQGNSGTAA QIARKYIGDR PDVIVAIATP SAQAVVAATR DVPVVFSAVT
DPVAAKLVKT WSASGSNVTG VSDLSPLDKH LALIKQILPQ ARRIGVIYSP GEANSVAIVD
ALKKAAPAAG LTLVEAAAAR TVDVASAAQS LVGRADVIYA PTDNNVMSAF EGIVKVAQQA
KLPVIAADTD AVKRGAVAAL GLNYYDLGRQ TGKVVARILN GEAAGSIASQ VSSTFELHVN
PAAATRQGVT LSQAFIQSAK VVVR
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