| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2036 |
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| Symbol | |
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| ID | 6162264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2211832 |
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| End bp | 2214405 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664805 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001791068 |
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| Protein GI | 171058719 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.026609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCG TCGAGGACCA GCCTCCGGCC GACCCGCCAC GCGCCGCCGT CGGCGATGGG
CACGGCTTGA GCAGCACCGA AGCCCGGCAG CGCCTCGCGC TCGACGGCCC GAACGCGCTG
CCGGAGTCGC AGCCGCGCAG CGCATTGCGC CTGCTGGGCG ACGTGCTGCG CGAGCCGATG
TTCCTGCTGC TGGTGGCCTG CGGCGCGGTC TACCTGGTGC TCGGCGACCG CAACGAGGCG
CTGATGCTGC TGGGCTTCGT GTTCGTGGTG ATGGGCATCA GCTTCGTGCA GCAGCGCCGC
ACCGAGCGCT CGCTCGACGC GCTGCGCGAG CTGTCGAGCC CGCAGGCGCT GGTGCTGCGC
GACGGCGTGG CGCGCAAGAT CGCCAGCCGC GAGCTGGTGC GCGGCGACAT CGTGCTGCTG
GCCGAAGGTG ACCGCGTGCC GGCCGACATG GCGCTGCTGC AGTCGGCCAA CCTGTCGGTC
GACGAGTCGA TGCTGACGGG CGAATCGGTG CCGGTGAGCA AGCGGGTCGG CGCGGCTGAT
GACGACCAGA ATGCCGGCCA GGTGTTCTCC GGCACGCTGA TCACACAAGG CACGGCGCGC
GCCCGGGTGA CGGCCACCGG CGAGCGCAGC GCGCTCGGGC GCATCGGCCG GTCGCTCGAA
GCGCTGGGCG CCGAGGACAC GCCGATCCAG CGCGAGACTC GCCAGATCGT GCAGCGCGTG
GCCGTGCTCG GCCTGCTGCT GGCGGCCGGC CTGGCGCTGG CCTGGTGGCT CACGACCGGC
GACTGGCTGC GCGGCCTGCT CGCCGGCCTG ACGCTGGCGA TGGCGGTGCT GCCCGAGGAA
CTGCCGGTGG TGCTGACGCT GTTCCTGGGT CTCGGCGCCT GGCGGCTGAC GCGCGAGCAG
GTGCTGGCGC GCAGCATCCC GGCGGTCGAG CTGCTGGGCG CCACCACCGT GCTGTGTGTC
GACAAGACCG GCACGCTGAC CGCCAACCGG ATGGCGGTGC GCTCGATCCG GTCCGAGGCC
GATGACTACG ACAGCGTCAG TGCCCTGCCC TTGCAGGACG CGGTGCACGA CGTGCTCGAG
TTCGCCGTGC TCGCCAGCCA CCGCCGCGCC TTCGACCCGA TGGAGAGCGC CATCGGCGCC
TGCGGCCAGC GGCTGCTGGC GGACACCGAA CACCTGCACG GCGACTGGAC GCTGGTCGAC
GACTACCCGC TGTCGCCCGA GATGCTGGCG ATGTCGCGCG TCTGGCAATC GCCCGACCGC
AGCGAACGCA TGATTGCTGC CAAGGGCGCG CCCGAAGCGA TCGTCGACCT CTGCCACCTC
GACACCACCC GCCACGCCGC GATCGCCGAG CAGGTGGCGG CGATGGCCGG CAACGGCCTG
CGGGTGCTCG GCGTGGCGCG GGCGGTGTTC GCGGCGCAGG CGCTGCCGGG CAACCAGCAC
GATTTCGACT TCGAGTTCCT CGGCCTGATC GCGCTCGAAG ACCCGGTGCG CCCGGACGTG
CCGCAGGCCA TCGCCGAGTG CCGAGCCGCC GGCATCCGGG TCGTGATGAT CACCGGCGAC
CACCCGGCCA CCGCCACCTC GGTGGCGCGC CAGGCCGGCC TGGACGCCGA CGGCCAGGTG
ATGACCGGCA CCGAACTCGA TGCGCTCGGC GACACCGAAC TGGCCGCCAG GCTGGTCGAC
ACGTCGATCT TCTGCCGCGT GCAGCCCGAG CAGAAGCTGC GGCTGGTGCA GGCCTTGCGC
GCCCGTGGCG ACGTGGTCGC GATGACCGGC GACGGCGTCA ACGACGCACC CGCGCTGAAG
GCCGCCCACA TCGGCGTGGC GATGGGCGCG CGCGGCACCG ACGTGGCGCG CCAGGCCGCG
GCGCTGGTGC TGCTGAACGA CGATTTCGCC TCGCTGGTCA CCGCGCTGCG CTACGGCCGG
CGGGTGTTCG CCAACCTGCG CAAGGCCTTC GTGTTCGTGA TCGCGGTGCA CCTGCCGATC
ATCGGCCTGT CGATCCTGCC GGTGCTGCTG GGCTGGCCGA TGCTGCTGAT GCCGGTGCAC
ATCCTGTTCC TGCAACTCAT CATCGACCCG GCCTGTTCGG TGGTGTTCGA GGCCGAGCCG
CTGGAGCCGC AGGCCATGAC CGCGCCGCCG CGCCGCCCGG ACGCACGCCT GTTCGACGCC
GCCGTGTTGG TCCGCGGCCT GTGGCAAGGC GCCGGCCTGC TCGTGCTGCT GGTGGCGGTG
TACGCGCTGG CGCGCTCGGC GGGGCAAGCC GACGACGCGG CGCGCACGCT GCTGTTCACC
GCGCTGGTGC TGTCGAATCT GGCGCTGATC CATGCCAACC GCGCGTGGGG GCCGGTGTCG
TGGACGGCCA ACGGCAGCGC CAACCACGCC TTCCGGTGGA TCGCGCTGGC GGCCGTCGGG
CTGCTCGGCC TGGTGCTCGG CGTGCCGGCG GTGCGGCGGG TGTTCGCGTT TGCGCCGCCG
TCGGCCGTGT TGCTGCTGGT CGGCGTGGGT ACCGCGCTGC TGAGCCTGCT GTGGTTCGAG
GCGGTCAAGT GGTGGCTCAG CCGCCCGGCA GCGGCAGCGC GCTGGTGCAC TTGA
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| Protein sequence | MIRVEDQPPA DPPRAAVGDG HGLSSTEARQ RLALDGPNAL PESQPRSALR LLGDVLREPM
FLLLVACGAV YLVLGDRNEA LMLLGFVFVV MGISFVQQRR TERSLDALRE LSSPQALVLR
DGVARKIASR ELVRGDIVLL AEGDRVPADM ALLQSANLSV DESMLTGESV PVSKRVGAAD
DDQNAGQVFS GTLITQGTAR ARVTATGERS ALGRIGRSLE ALGAEDTPIQ RETRQIVQRV
AVLGLLLAAG LALAWWLTTG DWLRGLLAGL TLAMAVLPEE LPVVLTLFLG LGAWRLTREQ
VLARSIPAVE LLGATTVLCV DKTGTLTANR MAVRSIRSEA DDYDSVSALP LQDAVHDVLE
FAVLASHRRA FDPMESAIGA CGQRLLADTE HLHGDWTLVD DYPLSPEMLA MSRVWQSPDR
SERMIAAKGA PEAIVDLCHL DTTRHAAIAE QVAAMAGNGL RVLGVARAVF AAQALPGNQH
DFDFEFLGLI ALEDPVRPDV PQAIAECRAA GIRVVMITGD HPATATSVAR QAGLDADGQV
MTGTELDALG DTELAARLVD TSIFCRVQPE QKLRLVQALR ARGDVVAMTG DGVNDAPALK
AAHIGVAMGA RGTDVARQAA ALVLLNDDFA SLVTALRYGR RVFANLRKAF VFVIAVHLPI
IGLSILPVLL GWPMLLMPVH ILFLQLIIDP ACSVVFEAEP LEPQAMTAPP RRPDARLFDA
AVLVRGLWQG AGLLVLLVAV YALARSAGQA DDAARTLLFT ALVLSNLALI HANRAWGPVS
WTANGSANHA FRWIALAAVG LLGLVLGVPA VRRVFAFAPP SAVLLLVGVG TALLSLLWFE
AVKWWLSRPA AAARWCT
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