| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2028 |
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| Symbol | |
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| ID | 6161558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2200996 |
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| End bp | 2201472 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641664797 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_001791060 |
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| Protein GI | 171058711 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.971325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCG CTCTCAATAA ATCTCTCCCC GACCTTGAAG CGAACGCCAC GGGAGGCATC
AAGTTCACTC CTCAGGCCTT TCTGGGCAAG ACGGTCGTAC TTTATTTCTA CCCGAAGGAC
AACACGCCGG GTTGTACCAC CGAAGCGATG CAGTTCCGCG ATCACCACAA GGAATTCACC
AATGCCGGCG CAGTGGTATT CGGGGTTTCG CGCGACAACA TGGCGTCGCA CGACAAGTTC
AAGCAGAACC TCGAACTGCC CTTCGAGCTG ATTGCCGACA CCGAAGAAAA GCTCTGCCAC
ATGTTCGGCG TGGTCAAGAA CAAGATCATG TACGGCAAGA AGGTCAAGGG GATCGAACGC
TCGACCTTCC TGATCGACAC CGAAGGCGTG CTGCGCGCCG AGTGGCGCGG CCTCAAGGTG
GCCGGTCACG TCGAAGAAGT GCTGAAGGCG GTGCAGGAAC TCAAGAGCCC GGCCTGA
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| Protein sequence | MTPALNKSLP DLEANATGGI KFTPQAFLGK TVVLYFYPKD NTPGCTTEAM QFRDHHKEFT
NAGAVVFGVS RDNMASHDKF KQNLELPFEL IADTEEKLCH MFGVVKNKIM YGKKVKGIER
STFLIDTEGV LRAEWRGLKV AGHVEEVLKA VQELKSPA
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