Gene Lcho_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2027 
Symbol 
ID6161557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2200527 
End bp2200898 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content66% 
IMG OID641664796 
Producthypothetical protein 
Protein accessionYP_001791059 
Protein GI171058710 
COG category[S] Function unknown 
COG ID[COG3737] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.977689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTCC AGCCCGACCG CATCGAAGGC GTCAACGTCA TCACCGGCTA CACGTCAGCC 
AGCATCAACG TCAACGCTCA GCCCTGGGAT TGCAGCGTGA TCGTCCCGTT CCAGGGCGAC
ATCCTGGCCT GGCCGTGTGC CCGTTTCGAC GAACTGGCCG AGTCGCATTT CGAGCCGCTC
CTGGCGCTGC GGCCGGAGCT GGTGATCGTC GGCAGCGGGC GTCAACATCG TTTCGTGCCG
CCGGTGCTGG TGCGTGCGCT GATCGCCAAA GGCATCGGCG TCGAGAGCAT GGACACGCAG
GCGGCCTGCC GCACGTACAA CATCCTGGCG GGAGAAAGCC GGCGCGTGGT GGCGGCGCTG
CTGCTCGATT GA
 
Protein sequence
MKFQPDRIEG VNVITGYTSA SINVNAQPWD CSVIVPFQGD ILAWPCARFD ELAESHFEPL 
LALRPELVIV GSGRQHRFVP PVLVRALIAK GIGVESMDTQ AACRTYNILA GESRRVVAAL
LLD