Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2027 |
Symbol | |
ID | 6161557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2200527 |
End bp | 2200898 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641664796 |
Product | hypothetical protein |
Protein accession | YP_001791059 |
Protein GI | 171058710 |
COG category | [S] Function unknown |
COG ID | [COG3737] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.977689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATTCC AGCCCGACCG CATCGAAGGC GTCAACGTCA TCACCGGCTA CACGTCAGCC AGCATCAACG TCAACGCTCA GCCCTGGGAT TGCAGCGTGA TCGTCCCGTT CCAGGGCGAC ATCCTGGCCT GGCCGTGTGC CCGTTTCGAC GAACTGGCCG AGTCGCATTT CGAGCCGCTC CTGGCGCTGC GGCCGGAGCT GGTGATCGTC GGCAGCGGGC GTCAACATCG TTTCGTGCCG CCGGTGCTGG TGCGTGCGCT GATCGCCAAA GGCATCGGCG TCGAGAGCAT GGACACGCAG GCGGCCTGCC GCACGTACAA CATCCTGGCG GGAGAAAGCC GGCGCGTGGT GGCGGCGCTG CTGCTCGATT GA
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Protein sequence | MKFQPDRIEG VNVITGYTSA SINVNAQPWD CSVIVPFQGD ILAWPCARFD ELAESHFEPL LALRPELVIV GSGRQHRFVP PVLVRALIAK GIGVESMDTQ AACRTYNILA GESRRVVAAL LLD
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