| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2025 |
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| Symbol | |
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| ID | 6163574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2197766 |
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| End bp | 2199082 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664794 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001791057 |
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| Protein GI | 171058708 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCA TCCAAGTCGG CCTGCTGGGC ATCGGTACCG TCGGCAGCGG CACGTTCAAC
GTGCTCGCCC GCAACCAGGA AGAAATCCGC CGCCGCGCCG GCCGTGGCAT CGAGATCACG
ATGGTGGCCG ACCTCAACGT CGAGCGCGCC CGCGAGATCG TCGGCGACGC CGTCCAGGTG
GTGGCCGACG CCCGCGAGGT GATCGCCAAC CCCGAGATCG ACATCGTCAT CGAGCTGATC
GGCGGCTACG GCATCGCCCG CGCGCTGGTG CTCGAAGCGA TCGCCGCGGG CAAGCACGTC
GTCACCGCCA ACAAGGCGCT GCTGGCCGTG CACGGCACCG AGATCTTCGC CGCCGCGCGC
GAAAAGGGCG TGATCGTCGC CTTCGAGGCC GCCGTCGCCG GTGGCATCCC GATCATCAAG
GCGCTGCGTG AAGGCCTGAC CGCCAACCGC ATCCAGTGGA TCGCCGGCAT CATCAACGGC
ACCACCAATT TCATCCTGAG CGAGATGCGC GACAAGGGCC TCGACTTCGA CGTCGTGCTC
AAGCAGGCGC AGGCGCTGGG TTATGCCGAA GCCGACCCGA CCTTCGACAT CGAAGGCGTC
GACGCCGCGC ACAAGGCCAC GTTGATGAGC GCGCTGGCGT TCGGCATCCC GGTGCAGTTC
GACCGCGCCC ACATCGAAGG CATCACCAAG CTGGGCGCGG CCGACATCCG CTACGCCGAG
CAGCTCGGCT ACCGCATCAA GCTGCTGGGC ATCGCCAAGC GCCAGGCGGA CGGCGGCGGT
ATCGAGCTGC GCGTGCACCC GACGCTGGTG CCGAGCAAGC GCCTGATCGC CAACGTCGAA
GGCGCGATGA ACGCCGTGAT GGTGCAGGGC GACGCCGTCG GCACCACGCT GTACTACGGC
AAGGGCGCCG GCAGCGAGCC GACCGCATCG GCCGTGATCG CCGACCTGGT CGACATCACC
CGCCTGCACA CCGCCGACCC GGATCACCGC GTGCCGCACC TGGCCTTCCA GCCCGACGAG
CTGCACGCCA CGCCGATCGT CGGCATCGAC GCCGTGCGCA CCGCCTTCTA CCTGCGCCTG
CGCGTGGCCG ACCAGAAGGG CGTGCTGGCC GCCATCACCC GCATCCTGGC CGAGAGCGAC
ATCTCGATCG ACGCAGTGCT GCAGCGTGAA TCGGCCGAAG GCGAGAACCA GACCGACGTG
ATCATCCTGA CGCACGAGAC CGTCGAGGGC CGCATGCGCG CCGCGCTGGC GCAGATGCAG
GCGCTGCCGA CGGTGCTGGC GCCGATCGTG AGCATCCGCA AGGAAGAGCT GGCCTGA
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| Protein sequence | MKPIQVGLLG IGTVGSGTFN VLARNQEEIR RRAGRGIEIT MVADLNVERA REIVGDAVQV
VADAREVIAN PEIDIVIELI GGYGIARALV LEAIAAGKHV VTANKALLAV HGTEIFAAAR
EKGVIVAFEA AVAGGIPIIK ALREGLTANR IQWIAGIING TTNFILSEMR DKGLDFDVVL
KQAQALGYAE ADPTFDIEGV DAAHKATLMS ALAFGIPVQF DRAHIEGITK LGAADIRYAE
QLGYRIKLLG IAKRQADGGG IELRVHPTLV PSKRLIANVE GAMNAVMVQG DAVGTTLYYG
KGAGSEPTAS AVIADLVDIT RLHTADPDHR VPHLAFQPDE LHATPIVGID AVRTAFYLRL
RVADQKGVLA AITRILAESD ISIDAVLQRE SAEGENQTDV IILTHETVEG RMRAALAQMQ
ALPTVLAPIV SIRKEELA
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