| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2010 |
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| Symbol | |
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| ID | 6160761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2179551 |
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| End bp | 2181500 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664779 |
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| Product | protein-disulfide reductase |
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| Protein accession | YP_001791042 |
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| Protein GI | 171058693 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0231364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTTT CCACTTATCC GGCGCTGCGG ACGCGGTGCC TCTCGCGGCT CGCACGTGTG
CGCCAGGACC TCCTCGTGCC GCTGTTGCTG ATGCTGTCGG TGCTGCTCGG CGGTTGGCCG
GCGGCCGCTG CGGCGGCTGA CGAGTTTCTC GAGCCCGACC AGGCCTTCAA GCTCAGCGCC
CGCAGCCCCG ACGGCGCCAG CATCGAGCTG CGCTACGAAG TCGCGCCCGG TTACTACCTC
TACCGCGAGC GCTTCGCGGT CGAAGCGGCG CCGACCGGCG TGAAGCTGGG CGAGGTGCTC
TATCCGCCGG GCAAGATCAA GTTCGACGAA ACCTTCCAGA AGGACGTCGA GAGCTACCGC
GACACCTTGC TCGTGTCGGT TCCGGTGCTG GCCGGTCCGG CGCAGTTCAA GCTGGCCGTC
ACCAGCCAGG GCTGCGCCGA TGCGGGCCTG TGCTACCCGC CGCGCCAGCA GGTGCTGAAG
GTGCAGATCG ATGGTGGCGC CGTCCGCCAG GTCGAGTTGA TGGCCGAAGA GGCCGGCCTG
GCCTGGCAGC CGGCCCCCTC CGAACTGCTG ACGATCACCG CCCAGCGTGT TGCCACCCGC
CCGGCCGCAG CGTCGCCCGA CAGCGCCACC GCGGCGCTGC AATCGGGCAG CCTCTGGACG
ATCGCGGGCG TGTTCCTGCT CGCCGGCGTG CTGCTGTCGT TCACGCCCTG CGTGCTGCCG
ATGGTGCCGA TCCTGTCGTC GATCATCGTC GGCCAGGGCG GGCCGGTGTC GCGCTGGCGC
GGGCTCGGGC TGTCGGTCAG CTACTCGCTC GGCATGGCGC TGGTCTACAC GCTGTTCGGC
GTGGCCGCCG GCTTGGCCGG CGAGGGACTG GCCGCCGCGC TGCAGAACCC CTGGGTGCTG
GGCGCCTTCG CGCTGCTGCT GGTGGGGCTG TCGCTGTCGA TGTTCGGCTA CTACGAGCTG
GCGCTGCCGC ACGCGCTGCA AAGCCGGCTG GCCCAGGTCT CGAGCGGCTT CCAGGGCGGC
CAGCACCTGG GCGTGTTCGC GATGGGCGGG ATCTCCGCCC TGATCGTCGG GCCGTGCGTG
GCCGCGCCGC TGGCCGGCGC GCTGGTCTAC ATCAGCCAGA CCCGCGACGT GCTGCTGGGC
GCCGTGGCGC TGTTCGCGAT GGCCTGCGGC ATGAGCCTGC CGCTGCTGCT GGTGGGCGTG
TCGGCCGGGT CGCTGCTGCC GCACTCGGGG GCGTGGATGG AGTCGGTCAA GCGCTTCTTC
GGCGTGCTGC TGATCGCGGT GGCGCTGTGG ATGGTCACGC CGGTGCTGCC GGTCTGGCTC
ATGATGGCCG CCTGGGGCAG CCTGATGCTG GTGAGCGCGT CCTACCTCGG GCTGCTCGAG
CCGCTGGCGC CGACGGCCCG CCGGTCGGCC CACCTGGGCA AGGGGCTGGC GCTGGTGCTG
GCCATCGGCG GCGCGGCGCA ATGGCTGGGC ATGCTCTCGG GCGGGCGTTC GCTGCTGCAG
CCGCTCTCGC ACCTCGTCAG CTCGGTCAGC ACCGACGCGC GGGGCGCCGT GCTGGCCGAC
GGCAGCGGTC GGTCTTCGCC GACCCAGGCG GGCGAGGTGC ATTTCCAGCG CGTCAAGTCG
GTGGCCGAAC TCGACGCCCT GCTGCTCACC GCCGGCAAGC CGGTGATGCT CGACTTCTAT
GCCGACTGGT GCGTCTCGTG CAAGGAGTTC GAGCAGTTCA CCTTCCGTGA CCCGCAGGTC
CAGGCCAAGC TGGCCGGCGC GGTGCTGGTG CAGGCTGACG TGACCGCCAA CGACGCCGAC
GACCGCGCCC TGCTCAAGCG CTTCCAGCTG TTCGGCCCGC CCGGCATCAT CTTCTTCGAC
CCGCAAGGGC GCGAGCAGGC CGGAGCGCGC GTGATCGGCT ACCAGAACGC CGAGCAGTTC
CTGCGCAGCC TGCAGACCGC CGGCCTGTGA
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| Protein sequence | MIVSTYPALR TRCLSRLARV RQDLLVPLLL MLSVLLGGWP AAAAAADEFL EPDQAFKLSA
RSPDGASIEL RYEVAPGYYL YRERFAVEAA PTGVKLGEVL YPPGKIKFDE TFQKDVESYR
DTLLVSVPVL AGPAQFKLAV TSQGCADAGL CYPPRQQVLK VQIDGGAVRQ VELMAEEAGL
AWQPAPSELL TITAQRVATR PAAASPDSAT AALQSGSLWT IAGVFLLAGV LLSFTPCVLP
MVPILSSIIV GQGGPVSRWR GLGLSVSYSL GMALVYTLFG VAAGLAGEGL AAALQNPWVL
GAFALLLVGL SLSMFGYYEL ALPHALQSRL AQVSSGFQGG QHLGVFAMGG ISALIVGPCV
AAPLAGALVY ISQTRDVLLG AVALFAMACG MSLPLLLVGV SAGSLLPHSG AWMESVKRFF
GVLLIAVALW MVTPVLPVWL MMAAWGSLML VSASYLGLLE PLAPTARRSA HLGKGLALVL
AIGGAAQWLG MLSGGRSLLQ PLSHLVSSVS TDARGAVLAD GSGRSSPTQA GEVHFQRVKS
VAELDALLLT AGKPVMLDFY ADWCVSCKEF EQFTFRDPQV QAKLAGAVLV QADVTANDAD
DRALLKRFQL FGPPGIIFFD PQGREQAGAR VIGYQNAEQF LRSLQTAGL
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