Gene Lcho_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1992 
Symbol 
ID6163240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2160284 
End bp2160847 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID641664761 
Productphasin family protein 
Protein accessionYP_001791024 
Protein GI171058675 
COG category 
COG ID 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000361107 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAATT CCCCCGAGCA ATTCGCCGCT GCTGGCAAGG CCAACCTCGA AGCCCTGGTC 
GAACTGGGCC AGAAGACTTT TGAAGGCGTC GAGAAGCTGG TCGAACTGAA CCTGCAAGCC
GCCCGCTCGA ACATGGGCGA AGGCGTCGAC GCTGCCAAGG CACTGTTCGC GGTCAAGGAT
GCTCAGGAGC TGTTCGCCCT GCAATCGTCG CTGATGCAGC CCGCCACCGA AAAGGCCACC
GCCTACGGTC GTCAGGTGTA CGAGATCGCC CAGAGCACGC AAGCTGAAGT CGCCAAGCTG
GCCGAAGCCC AGTACGCCGC CCTGCAGCAG AACATTGCCG CGCTGGTCGA CACCGCCGTC
AAGAACGCCC CGGCCGGCAG CGAAGGCGCT GTTGCCATGG TTCGTCAGGC CGTGACTGCC
GCCAATACGG CGCTCGAAAA CGCCCAGAAG GCTGCCAAGC AGGCCGTCGG TGTTGCTGAA
GCCAACTTCG AAGCCATGAG CCAGACCGCT GCCAAGGCCG CGTCGGCTGT GGCCCCGAAG
GCTGCTCGCC GCGCTGCGGC CTGA
 
Protein sequence
MSNSPEQFAA AGKANLEALV ELGQKTFEGV EKLVELNLQA ARSNMGEGVD AAKALFAVKD 
AQELFALQSS LMQPATEKAT AYGRQVYEIA QSTQAEVAKL AEAQYAALQQ NIAALVDTAV
KNAPAGSEGA VAMVRQAVTA ANTALENAQK AAKQAVGVAE ANFEAMSQTA AKAASAVAPK
AARRAAA