Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1992 |
Symbol | |
ID | 6163240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2160284 |
End bp | 2160847 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641664761 |
Product | phasin family protein |
Protein accession | YP_001791024 |
Protein GI | 171058675 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01841] phasin family protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00000361107 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAATT CCCCCGAGCA ATTCGCCGCT GCTGGCAAGG CCAACCTCGA AGCCCTGGTC GAACTGGGCC AGAAGACTTT TGAAGGCGTC GAGAAGCTGG TCGAACTGAA CCTGCAAGCC GCCCGCTCGA ACATGGGCGA AGGCGTCGAC GCTGCCAAGG CACTGTTCGC GGTCAAGGAT GCTCAGGAGC TGTTCGCCCT GCAATCGTCG CTGATGCAGC CCGCCACCGA AAAGGCCACC GCCTACGGTC GTCAGGTGTA CGAGATCGCC CAGAGCACGC AAGCTGAAGT CGCCAAGCTG GCCGAAGCCC AGTACGCCGC CCTGCAGCAG AACATTGCCG CGCTGGTCGA CACCGCCGTC AAGAACGCCC CGGCCGGCAG CGAAGGCGCT GTTGCCATGG TTCGTCAGGC CGTGACTGCC GCCAATACGG CGCTCGAAAA CGCCCAGAAG GCTGCCAAGC AGGCCGTCGG TGTTGCTGAA GCCAACTTCG AAGCCATGAG CCAGACCGCT GCCAAGGCCG CGTCGGCTGT GGCCCCGAAG GCTGCTCGCC GCGCTGCGGC CTGA
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Protein sequence | MSNSPEQFAA AGKANLEALV ELGQKTFEGV EKLVELNLQA ARSNMGEGVD AAKALFAVKD AQELFALQSS LMQPATEKAT AYGRQVYEIA QSTQAEVAKL AEAQYAALQQ NIAALVDTAV KNAPAGSEGA VAMVRQAVTA ANTALENAQK AAKQAVGVAE ANFEAMSQTA AKAASAVAPK AARRAAA
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