| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1984 |
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| Symbol | |
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| ID | 6163943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2151416 |
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| End bp | 2152117 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664753 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001791016 |
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| Protein GI | 171058667 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00015466 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAGG TTTACCCGAG CGCTGCCGCT GCGCTCGACG GCATCGTCCG CGACGGCCAG
CTGATGGCCG TGGGCGGCTT CGGCCTCTGT GGCATCCCCG AGGCCCTGAT CGACGCGCTG
CAGGCCAGCG CGGTCAAGAA CCTGACGGTG ATCTCGAACA ACGCCGGTGT CGACGGCTTC
GGCCTCGGCA AGCTGCTCGC CACGCGCCAG ATCAGGAAGA TGATCTCGAG CTACGTCGGC
GAGAACAAGG AGTTCGAGCG CCAGTACCTC AGCGGCGAAC TCGAACTCGA CTTCACGCCG
CAAGGCACGC TGGCCGAGAA GCTGCGCGCC GGCGGCGCCG GCATCCCGGC CTTCTTCACC
AAGACCGGCG TGGGCACGCT GGTGGCCGAA GGCAAGGAGA TCCGCGAGTT CGACGGCCAC
AAGTACGTGA TGGAGCGGTC GCTGACGCCC GAGGTGTCGC TGGTCAAGGC GTACATCGCC
GACAAGAGCG GCAACCTGGT CTTCAACAAG ACCGCGCGCA ACTTCAACCC CAACGTGGCG
ATGGCCGGCA AGATCACCGT GGTCGAGGTC GAGAAGATCG TCGAGACCGG CGAGCTCGAC
CCCGATCAGG TCCACCTGCC GGGCATCTTC GTGCACCGCA TCGTGCTGAA CGCGACGCCG
GAAAAGCGCA TCGAGCAGCG CACCGTCCGC AAGACCGCCT GA
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| Protein sequence | MNKVYPSAAA ALDGIVRDGQ LMAVGGFGLC GIPEALIDAL QASAVKNLTV ISNNAGVDGF
GLGKLLATRQ IRKMISSYVG ENKEFERQYL SGELELDFTP QGTLAEKLRA GGAGIPAFFT
KTGVGTLVAE GKEIREFDGH KYVMERSLTP EVSLVKAYIA DKSGNLVFNK TARNFNPNVA
MAGKITVVEV EKIVETGELD PDQVHLPGIF VHRIVLNATP EKRIEQRTVR KTA
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