| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1983 |
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| Symbol | |
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| ID | 6163942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2150743 |
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| End bp | 2151381 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664752 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001791015 |
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| Protein GI | 171058666 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000315327 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATGGA CCCGCGATGA AATGGCTGCG CGCGCTGCAA AAGAACTGCG CGACGGCTTC
TATGTGAACC TCGGCATCGG CTTGCCGACG CTGGTGGCCA ACCACGTGCC CGAAGGCATG
GAGGTGTGGC TGCAGAGCGA GAACGGCCTG CTCGGCATCG GCCCGTTCCC GACCGAGGAC
CAGGTCGACG CCGACCTGAT CAACGCCGGC AAGCAGACCG TCACCACGCT GCCCGGCTCG
GCCTTCTTCA GCAGCGCCGA CAGCTTCGGC ATGATCCGCG GCGGCAAGAT CAACCTGGCG
ATCCTGGGCG CGATGCAGGT CAGCGAGCAG GGCGATCTGG CCAACTGGAT GATCCCCGGC
AAGATGGTCA AGGGCATGGG CGGCGCGATG GACCTGGTGG CCGGCGTCGG CCGCGTGGTG
GTGCTGATGG AGCACGTGGC GACCAAGAAG GACGGCAGCA CCGACCTGAA GATCATCGCC
AACTGCACCC TGCCGCTGAC CGGCGTGGGT GTGGTCAACC GCATCATCAC CGACCTGGGC
GTGCTCGACG TGACGCACAA CGGGCTCGAG CTGGTGGAGC TGGCGCCGGG CGTCACCCGC
GACCAGATCC AGGCGGCGAC CGGCGTGGCA TTGCATTGA
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| Protein sequence | MAWTRDEMAA RAAKELRDGF YVNLGIGLPT LVANHVPEGM EVWLQSENGL LGIGPFPTED
QVDADLINAG KQTVTTLPGS AFFSSADSFG MIRGGKINLA ILGAMQVSEQ GDLANWMIPG
KMVKGMGGAM DLVAGVGRVV VLMEHVATKK DGSTDLKIIA NCTLPLTGVG VVNRIITDLG
VLDVTHNGLE LVELAPGVTR DQIQAATGVA LH
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