| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1981 |
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| Symbol | |
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| ID | 6163940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2148376 |
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| End bp | 2149137 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664750 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001791013 |
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| Protein GI | 171058664 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00793153 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCCA TCGCCCTTGT GACCGGAGCC GGCAGCGGCA TCGGCCGCGC CTGTGCCCAC
GCCCTGCTGG CCGACGGCTG GAACGTCGCC TTCGTGGGCC GCCGCGCCGA GACGCTGCAG
GCCGCCATCG ACGCCGCGCC CGACGTGAGC GGCGACATCG CGACGCGCAC CCTGGCGCTG
CCCGCCGACG TGTCCGACGC CGCCTCGGTG GCGGCCGCCT TCGAGGCCGT GCAGGCCCAT
TGGGGCCGGC TCGACCTGCT GTTCAACAAC GCCGGCATCT CGCTGCCTTC GACGATGCCC
GACGAGATCG GCATCGAAGA CTGGCGGCGT GTCGTCGACA CCAACCTCAA CGGCGCCTAC
TACTGCCTGG CGCAGGCCTT CAGGCTGATG CGCGCGCAGA GCCCGCAGGG CGGCCGGATC
ATCAACAACG GCTCGATCTC GGCCCACGTG CCGCGGCCGG GCTCGATCGC CTACACCGCC
ACCAAGCACG CCGTCAGCGG CCTGACCAAG GCGGCGGCGC TCGACGGCCG GCGCCACAAC
ATCGCGGTCG GCCAGATCGA CATCGGCAAC GTCGCCAGCG ACATGACCGA GCGCATGGCC
AAAGGCGTGC CCCAGGCCGA CGGCAGCATC AAGGCCGAAG CACGCATGGA CATGGCCGCG
GTGGCCGACA CCTTCATGGC GATGGCGCGC CTGCCGTTGT CGGCCAACGT GCTGACCATG
ACGGTGATGG CCACGCAGAT GCCCTACGTC GGACGCGGCT GA
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| Protein sequence | MKPIALVTGA GSGIGRACAH ALLADGWNVA FVGRRAETLQ AAIDAAPDVS GDIATRTLAL
PADVSDAASV AAAFEAVQAH WGRLDLLFNN AGISLPSTMP DEIGIEDWRR VVDTNLNGAY
YCLAQAFRLM RAQSPQGGRI INNGSISAHV PRPGSIAYTA TKHAVSGLTK AAALDGRRHN
IAVGQIDIGN VASDMTERMA KGVPQADGSI KAEARMDMAA VADTFMAMAR LPLSANVLTM
TVMATQMPYV GRG
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