| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1978 |
|---|
| Symbol | aat |
|---|
| ID | 6160741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 2146319 |
|---|
| End bp | 2147089 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641664747 |
|---|
| Product | leucyl/phenylalanyl-tRNA--protein transferase |
|---|
| Protein accession | YP_001791010 |
|---|
| Protein GI | 171058661 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
|---|
| TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.00862065 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCCT GGCTGCCCGA CGACAGCGAC AGCGCGCCCT TCCCGCCCAC CCGCCTCGCG
CTGGGCCCCG ACAGCGAGGC GCCGGGGCTG CTGTGCGCGG GCGGGCAGCT CAGCGTGGCG
CGGCTGCGCA TGGCCTACCG GCTGGGCATC TTCCCGTGGT ACAGCCAGGG CCAGCCGGTG
CTGTGGTGGA GCACCGACCC GCGCATGGTG CTGCAGGTGG CGCAGTTCAG GCTGCACCGC
TCGCTGAAGA AGACGCTGCG GCGCTTTCTC GTCACGCCGG GCAACGAGGT GCGCATCGAC
AGCGCCTTCG CCGACGTCAT CGACCACTGC AGCCGCACGC CGCGCGAAGG CCAGGACGGC
ACCTGGATCG TGCCCGAGGT CAAGGCCGCC TACGTGGCGC TGCACCGCGC CGGATCGGCC
CATTCCTTCG AGACCTGGGT CGACGGCGAA CTGGTCGGCG GCCTCTACGG CGTCAACATC
GGACGCATGT TCTACGGCGA GTCGATGTTC GCGCGCCGCA CCGATGCGTC GAAGATCGCC
CTGGCGGCGC TGGTGGCGTT CTGCCTGGCG CACGAGATCG CCTGGATCGA CTGCCAGATG
GAAACCGAAC ACCTGGCATC GCTGGGTGCG CAGCCGGTTC CGAGGGCGCA GTTCGAGGCC
CATCTGCGCC GGGTGGTCGA TCTGCCCGCC CCGAAGGATT GGTTTTATGA TCCTTCGTCG
TGGGCCCGGC TGGGAGACCG GGGCCCAGGT CAGCCGAGTC CATCTGCGTG A
|
|---|
| Protein sequence | MIPWLPDDSD SAPFPPTRLA LGPDSEAPGL LCAGGQLSVA RLRMAYRLGI FPWYSQGQPV
LWWSTDPRMV LQVAQFRLHR SLKKTLRRFL VTPGNEVRID SAFADVIDHC SRTPREGQDG
TWIVPEVKAA YVALHRAGSA HSFETWVDGE LVGGLYGVNI GRMFYGESMF ARRTDASKIA
LAALVAFCLA HEIAWIDCQM ETEHLASLGA QPVPRAQFEA HLRRVVDLPA PKDWFYDPSS
WARLGDRGPG QPSPSA
|
|---|
| |