| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1976 |
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| Symbol | |
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| ID | 6160739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2143136 |
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| End bp | 2145088 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664745 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_001791008 |
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| Protein GI | 171058659 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0621035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTATA TCGTCCTGGC CCGCAAGTAC CGCCCGCGCA GCTTCGCCGA GCTGGTGGGG
CAGGCGCACG TCGTGCAGGC CCTGAGCAAT GCCCTGACGC AACAGCGTCT GCACCACGCC
TACCTGTTCA CCGGCACCCG CGGCGTCGGC AAGACCACCG TCTCGCGCAT CCTGGCCAAG
AGCCTGAACT GCGTCGGCGC CGACGGCCTG GGCGGCATCA CCGCCACGCC ATGTGGCGTG
TGCAGCGCCT GCCGCGACAT CGACGCCGGC CGCCACGTCG ACTATGTCGA GCTCGATGCG
GCGTCGAACC GCGGTGTCGA CGAGATCAGC CAGCTGCTCG ATCAGGCCGT CTACAAGCCG
GTGGTGGGGC GCTTCAAGGT CTACATGATC GACGAGGTGC ACATGCTCTC GACGACCGCC
TTCAACGCGA TGCTGAAGAC GCTCGAGGAG CCGCCCGAGT ACCTGAAGTT CGTGCTCGCC
ACCACCGATC CGCAGAAGGT GCCGGTGACG GTGCTGAGCC GCTGCCTGCA GTTCAACCTG
CGGCCGATGG CCACCGAAAC CGTCTTCGAG CACCTGCAGA CAGTGCTGAA CGCCGAATCG
GTGCCGTTCG AGGATCCGGC GCTGCGGCTG CTGGCGCGTG GCGCGCGCGG CTCGATGCGC
GACGCGCTGT CGCTCACCGA CCAGGCCATC GCCTACGCCG GCGGCCACCT CGGCGAGGCC
GCCGTGCGCC AGATGCTGGG TGCGGTCGAC CGCGGTCATG GGGTGCGCAT CGTCGAGGCG
CTGGCCGCCA GCGACGGCGT GGCGCTGGTG CGCACGGTCG ACGAGCTGCG CGCGCAGGGC
CTGTCGGCCG CCGGCACGCT CGAAGAGCTG GCCGATCTGG CGCAGCAGAT GGCGGTGCTG
CAGGCAGTGC CGCAGGCGAT CGACCCGACC CATCCCGACG CGGCGGTGCT GCAGGGCCTG
GCGCCCTTGC TGCCGGCCGA CGAGACCCAG CTGCTCTACA GCATCGCGCT GCACGGCCGT
GCCGAACTGG CGCTGGCGCC CGATGAATAC AGCGGCCTGG TGATGGTGCT GCTGCGCATG
CTGGCGTTCC GGCCGGCCGG TGGTGCCGCT GCGTCGGCGG TCAGGCCGGC AGCCGCCGCG
CCGATCGTCG CCGCAGCGCC CGTGCCGGCT CCGGCCGTGG CAGCCAGCCG CGAGCTGCTG
CGCACCAGCG GCGCCGTCAG CAAGACGACG GTGCCATCGG TGGCGCAGGC ACCGTCGGCC
CCACCGGTCC GCCCGGAGCC GCCGCGCGCA TCCCCGACCC CGATGGCTGC CCCGGTTGCT
GCCCCGATGG CTGCCCCGAC TGCGATCAGC GTGTCCGAAC CGGCGCCACC GTTGCGTCCG
GCGGCGGCGC CTGCTGCGGC AGCCGAAACG CCACCCTGGG ACGACGAACC GCCCTGGGTG
CGCGAAGAGT CCGAGTCATC GGACGGCGCC CGCCCGACCG CCCGCAACGA GAGCCAACCG
CCATCGCCCG AAGTCGTCGA CGCACCGCAG GCCGCCGACA TCCCCGCGCC CCATCCGGCC
CAGGCCCGCT GGCTGGCCAC CGTGCAGCAG CTGCTCGCGC AGACCAAGGT CACCGGCCTG
GTGCGTGAGC TGGCCTGGCA GGCCGAATGC ACCGGCATCG ACGACGCTGC CGATCCGGTC
TGCTGGCAGC TGCGCGTCGA GCGCGAATCG CTGCGCCAGG CCAGCCACCG CGAGCGCCTG
CAGGCCGCCA TGAGCGAACT GCTCGGACAG CCGCAGCGGC TGGAGATCGA CGTCGGTGCC
GTCACCGACA GCGCCGCCCG CCGTGACGTG GCAGCCAGGT CGCAGGCCCA GGCGCAGGCC
GAACGGGTGA TCCGCAACGA TCCGGTGGTG CAGCAGTTGC TGGCGCGCTA CCCGAGCGCG
CGCATCGTGC CGGGTTCGGT GCGGCCTCGC TGA
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| Protein sequence | MSYIVLARKY RPRSFAELVG QAHVVQALSN ALTQQRLHHA YLFTGTRGVG KTTVSRILAK
SLNCVGADGL GGITATPCGV CSACRDIDAG RHVDYVELDA ASNRGVDEIS QLLDQAVYKP
VVGRFKVYMI DEVHMLSTTA FNAMLKTLEE PPEYLKFVLA TTDPQKVPVT VLSRCLQFNL
RPMATETVFE HLQTVLNAES VPFEDPALRL LARGARGSMR DALSLTDQAI AYAGGHLGEA
AVRQMLGAVD RGHGVRIVEA LAASDGVALV RTVDELRAQG LSAAGTLEEL ADLAQQMAVL
QAVPQAIDPT HPDAAVLQGL APLLPADETQ LLYSIALHGR AELALAPDEY SGLVMVLLRM
LAFRPAGGAA ASAVRPAAAA PIVAAAPVPA PAVAASRELL RTSGAVSKTT VPSVAQAPSA
PPVRPEPPRA SPTPMAAPVA APMAAPTAIS VSEPAPPLRP AAAPAAAAET PPWDDEPPWV
REESESSDGA RPTARNESQP PSPEVVDAPQ AADIPAPHPA QARWLATVQQ LLAQTKVTGL
VRELAWQAEC TGIDDAADPV CWQLRVERES LRQASHRERL QAAMSELLGQ PQRLEIDVGA
VTDSAARRDV AARSQAQAQA ERVIRNDPVV QQLLARYPSA RIVPGSVRPR
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