Gene Lcho_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1958 
Symbol 
ID6161747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2122248 
End bp2122706 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content68% 
IMG OID641664727 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001790990 
Protein GI171058641 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CCGTTACCCC TTACCTGAGT TTTCCCGGGA CGACGCGAGA GGCGTATGCG 
TTCTACGCCA AGACCCTTGG CGCGACCATC GAAACGATGA TGTCGTACGC CGACATGCCA
GCGTCGCCCG CCAACGCCGA CACGGGCTGC GCCGACGGCG GCGCGCCGCC CACGGGCGAC
GGCATCATGC ACGCCTGCCT GGCGCTGCCC GGGGGCGCCA TGATTTTCGC GGGCGACGTC
CCGCCCGGCA TGCCCTTCGA CGGCATCAAG GGCGTGATGC TTGCGCTGCA GTACGACACG
GTCGATCAGG CGCGCAGCGC GTTCGACGCG CTTTCGCAGG GTGGCCAGGT CACGATGCCC
CTTGCGCCGT CGTTCTGGGC CGAGGTCTTC GGCATGCTGA CCGACCGATT CGGCGTCGCC
TGGGCAGTCA ACGGCGCGCC GATCCAGTTT CAGAAGTAG
 
Protein sequence
MTTTVTPYLS FPGTTREAYA FYAKTLGATI ETMMSYADMP ASPANADTGC ADGGAPPTGD 
GIMHACLALP GGAMIFAGDV PPGMPFDGIK GVMLALQYDT VDQARSAFDA LSQGGQVTMP
LAPSFWAEVF GMLTDRFGVA WAVNGAPIQF QK