| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1956 |
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| Symbol | |
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| ID | 6161745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2119544 |
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| End bp | 2121403 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664725 |
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| Product | glutaminyl-tRNA synthetase |
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| Protein accession | YP_001790988 |
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| Protein GI | 171058639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC ACAAATCCAA TACGCACGCG GCCGCAGGCG GCGCGCCCGC CCTCAAGCCG
AGCAACTTCC TGCGCTCGAT CATCGAGCGC GACCTCGAGG CCGGCACCTA CGCCGGCCGC
CGTTTTGCCG GCACGCCCGG TGACGCGGCC CATCACGCCG CCGGCGAGCC CGACCCGGCG
CGCATCCGCA CCCGTTTCCC GCCCGAGCCC AACGGCTACC TGCACATCGG CCACGCCAAG
AGCATCTGCC TGAACTTCGG CCTGGCGCGC GATTTCGGTG GCGTCTGCCA CATGCGCTTC
GACGACACCA ACCCCGAGAA GGAAGAGCAG GAATACGTCG ACAGCATCCT CGACGCCGTG
CGCTGGCTCG GCTTCGGCTG GGAGACGCTC GACCCGGCGC AGCCCGGTGC CACGCGCAGC
CACCTGTTCT ACGCCAGCAA CTACTTCGAC TTCATGTACC GCGCCGCCGA GCACCTGATC
GGCGCCGGCC TGGCCTACGT CGACGAGCAG ACGCCCGAGC AGATGCGCGC CAACCGCGGC
GACTTCAACA CGCCCGGCAC CGACAGCCCG TTCCGCAGCC GCACGGTGGC CGAGAACCTG
GCGCGGTTCC ACCAGATGCG TGCCGGCGAG CTGCCCGACG GCGCGGCGGT GCTGCGCGCC
AGGATCGACA TGGCGTCGCC CAACATCAAC CTGCGCGACC CGGCGCTCTA CCGCATCAAG
CGCGCCACCC ACCACGCCAC CGGCGACACC TGGTGCATCT ACCCGATGTA CACCTTCGCG
CACCCGATCG AGGACGCGCT GGAGCAGATC ACCCACAGCA TCTGCACGCT CGAGTTCGAG
GACCAGCGGC CCTTCTACGA CTGGCTGCTC GAGCGCCTGA CCGAGCCGCA CACACGCGCC
GACGGCAGCG TGGCCGCCGG CCTGCTGGCC AAGCCGCTGC CCAGGCAGTA CGAGTTCGCG
CGGCTCAACA TCACCTACAT CATCACCAGC AAGCGCAAGC TCAAGCAGCT GGTCGACGAG
AACCATGTCA GCGGCTGGGA CGACCCGCGC ATGCCCACCA TCGTCGGCCT GCGCCGGCGC
GGCTACACGC CCGAGAGCCT GCAACTGCTG GCCGAGCGTA CCGGCGCCAG CAAGGCCAAC
AGCTGGATCG ACTACAGCTG GCTCGACATC GCGCTGCGCG ACGACCTGGA AGGCAAGGCG
CGGCGCGCGA TGGCGGTGAT CGACCCGATC CCGCTCAAGC TCAGCAACTG GGCCGAGGTG
TTCGGCAGCG ACGCGCACAC CGAGCCCTGC CACGCCCCGG CGCATCCGCA GCGGCCCGAG
CTCGGCCAGC GCGATTTCAG CCTCGGCCGC GAGGTCTGGG TCGAGCGTGA CGACTTCGCC
GAGCAGCCGC CGAAGGGCTT CTTCCGGCTG TTCCCGGGCA ACAAGGTGCG CCTCAAGTAC
GGCTACGTGA TCGAGTGCAC CGGCTGCGAG AAGGATGCCG ACGGCCGCGT CACCGCGGTG
CTGGCGCGTG TCGTGCCCGA CACCAAGAGC GGCACGCCCG GTGCCGACGC GGTCAAGGTC
AAGGGCGTGA TCACCTGGGT CGGCGTGCAC GACGGCGTGG CCGCCGAGCT GCGCCTGTAC
GACCGCCTGT TCACCGAAGC GCAGCCCGAT GCCGGCGGCA AGGATTTCCT GCAGGCGCTG
AACCCGGCGA GCAAGACGAT CGTGTCGGGC TTCGTGGAGC CGTCACTGGC CGCCATCGGT
GCCGACGAGC GGGTGCAGTT CGAGCGCCAC GGCTACTTCG TCACCGACCG CCTCGATCAC
GGCGCCGGCA AGCCGGTGTT CAACCGGATC ACCGGGCTGA AGGACGGCTG GGCCAAGTGA
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| Protein sequence | MSDHKSNTHA AAGGAPALKP SNFLRSIIER DLEAGTYAGR RFAGTPGDAA HHAAGEPDPA
RIRTRFPPEP NGYLHIGHAK SICLNFGLAR DFGGVCHMRF DDTNPEKEEQ EYVDSILDAV
RWLGFGWETL DPAQPGATRS HLFYASNYFD FMYRAAEHLI GAGLAYVDEQ TPEQMRANRG
DFNTPGTDSP FRSRTVAENL ARFHQMRAGE LPDGAAVLRA RIDMASPNIN LRDPALYRIK
RATHHATGDT WCIYPMYTFA HPIEDALEQI THSICTLEFE DQRPFYDWLL ERLTEPHTRA
DGSVAAGLLA KPLPRQYEFA RLNITYIITS KRKLKQLVDE NHVSGWDDPR MPTIVGLRRR
GYTPESLQLL AERTGASKAN SWIDYSWLDI ALRDDLEGKA RRAMAVIDPI PLKLSNWAEV
FGSDAHTEPC HAPAHPQRPE LGQRDFSLGR EVWVERDDFA EQPPKGFFRL FPGNKVRLKY
GYVIECTGCE KDADGRVTAV LARVVPDTKS GTPGADAVKV KGVITWVGVH DGVAAELRLY
DRLFTEAQPD AGGKDFLQAL NPASKTIVSG FVEPSLAAIG ADERVQFERH GYFVTDRLDH
GAGKPVFNRI TGLKDGWAK
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