| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1948 |
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| Symbol | |
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| ID | 6161354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2112164 |
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| End bp | 2112634 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664717 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_001790980 |
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| Protein GI | 171058631 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC TGCTCATCGC GGTGGGCCAA CGCCTGCCGG CATGGGCGGA CACGGCTTAC
GAGGACTACG CCAAGCGCTT CCCGCCGGAT CTGCGGCTGG AGCTCAAGGC GGTCAAGACC
GAGGCGCGCA CCACCGGCAA GCCGGTCGAG GCCCTGATGG CCGCCGAGAA GACCCGCATC
GAAGCCGCGC TGCCGCGTGG CTGTCGGCGG GTCGTGCTCG ACGAACACGG CCAGCGCGTC
ACCACGGCGC AGCTGGCCGA GCGGCTGGCC GTCTGGCAGC GCGACGGCCG TGATGTCGCG
CTGCTGGTCG GCGGCCCCGA CGGCCTCGAT CAGACGCTGC GTGACGGTGC CGACGAGAAG
CTGCGCCTGT CCGACCTGAC CCTGCCGCAT GCCTTCGTGC GCGTGATGCT GGCCGAGGCC
CTCTACCGCG CCTGGACGCT CAGCATCGGC CACCCCTATC ACCGTGAATG A
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| Protein sequence | MKLLLIAVGQ RLPAWADTAY EDYAKRFPPD LRLELKAVKT EARTTGKPVE ALMAAEKTRI
EAALPRGCRR VVLDEHGQRV TTAQLAERLA VWQRDGRDVA LLVGGPDGLD QTLRDGADEK
LRLSDLTLPH AFVRVMLAEA LYRAWTLSIG HPYHRE
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