| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1942 |
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| Symbol | |
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| ID | 6162548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2106388 |
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| End bp | 2107239 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664711 |
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| Product | tol-pal system protein YbgF |
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| Protein accession | YP_001790974 |
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| Protein GI | 171058625 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.452944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGT TCAATCTGCG TCGACCCCAG CTGCTGCGCG CCGCCAGGCC CGCGGTCCTG
GCCCTGCTGC TGGCGCCGCT GCTGGCCAGC GCCGGCCTGT TCGACGATGA AGAGGCGCGC
AAGGCGATCG TCGACCTGCG CAACCGGATC GACCGGATCG AGCTTCAGGA TCAGCAGCAG
GCCCAGCAGC TGACCGCCCG CAAGACCGAA AACGCCGACC TGACCGAGCA GGTCAACATC
CTCAAGCGCG GCATGCTCGA CCTGAACAGC CAGATCGAGA TGCTGCGCGC CGATCTCGCC
CGCCTGCGCG GGCAGGACGA GCAGGCCAGC CAGTCCTCGC GCGACCTGCT GCGCGAACTG
GCCGACGTGC AGCGCAAGCA GAAGGACCTG CTGGCCGCGC TCGCCGCGCA GGACGAGCGG
ATCCGGCGCA TGGAGCCGCA GAAGGTCAGC CTCGACGGTC AGGAAGCCAC GGTCGACGCC
GGCGAGAAGA AGGCGTACGA CGACGCCATC GGCATCCTGC GCAAGGGCGA GTTCGCCAAG
GCGGCCGAAG CGCTGCAGGG TTTCCAGCGC CGCTTTCCGA GCAGCCCCTA CAACGGCCAT
GTGCAGTATT GGCTGGGCAA TGCCCAGTAC GGCAAGGGCG AGGTCAAGGA AGCGGCACAG
ACCTTCCGCA CGCTCGTGAG CAACGCGCCG GACCATCCCC GCGCCGCCGA GGCCCTGCTC
GCGCTGGCCA ATTGCCAGGT CGAACTCAAG GATCCGAAGG CTGCGCGCAA GTCGCTCGAC
GAACTGGTCA AGAACTACCC GCAGTCCGAA GCCGCCCAGG CGGGTCGTGA ACGCCTGGCC
AAGCTCAAGT GA
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| Protein sequence | MNTFNLRRPQ LLRAARPAVL ALLLAPLLAS AGLFDDEEAR KAIVDLRNRI DRIELQDQQQ
AQQLTARKTE NADLTEQVNI LKRGMLDLNS QIEMLRADLA RLRGQDEQAS QSSRDLLREL
ADVQRKQKDL LAALAAQDER IRRMEPQKVS LDGQEATVDA GEKKAYDDAI GILRKGEFAK
AAEALQGFQR RFPSSPYNGH VQYWLGNAQY GKGEVKEAAQ TFRTLVSNAP DHPRAAEALL
ALANCQVELK DPKAARKSLD ELVKNYPQSE AAQAGRERLA KLK
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