| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1941 |
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| Symbol | |
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| ID | 6162547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2105221 |
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| End bp | 2106336 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664710 |
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| Product | protein of unknown function DUF395 YeeE/YedE |
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| Protein accession | YP_001790973 |
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| Protein GI | 171058624 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2391] Predicted transporter component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.368246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCT CCGAGGCATC GAATCTGACG GCCCAGGTAC TCTGGGCCGT GTTTCTTTTG
GCGCTGCTCT ACGGGGCGAT CGCCGAGCGC AGCCATTTCT GCACCATGGG CGCGGTCGCC
GATGTCGTCA ACTTCGGCGA CTGGCGCCGG CTGCACATGT GGGCGCTGGC GGCCGGGGTC
GTGACGATCG GATTCAACCT GATGGTGGCC GCCGGCTGGG TCAGCGCCGA CAAGACGCTG
TACGGCGGCT CACGCTGGCA ATGGGCGTCG GCCCTGGTCG GCGGCGCACT GTTCGGCTTC
GGCATGGTGC TGGCGTCGGG TTGCGGCAGC AAGAACCTGG TGCGGCTGGG CGGCGGCAAC
CTCAAGGCGC TGGTAGTGCT GCTCGTGATG GGGCTTTCGG CCTGGATGAC GCTGCGCGGG
CTGACCGCGA TGTGGCGTGT CGAGACAGTC GACCGCTGGG CCGTGTCACT GCCCGGCTCG
CAGGACTTGC CGAGCCTGAT CGCCGCCGGC TACGGCGGAT CGACGCCCGA TGTCGCGCTG
GTTGTCGGCA CCGTCGTCGG CACCGCCTTG CTGGCCTGGG CACTGTGGGC GCGACCGGGC
CGTGACGCCG GACTGCTGCT GGGCGGCATC GGCATCGGCG CCGTGGTGCT GGCGGTCTGG
TGGGTGTCCG GGCGCTTCGG TCATCTGGCC GAGCATCCCG AAACCCTCGA AGAAGCCTTT
CTCGGCACCG CCAGCCGGCG CATGGAGGCA CTCAGTTTCG TGACGCCGGT GGCGCAAGGT
CTCGAGTGGC TGATCTTCTA CTCCGATCAG GGCCGCCGGC TGAGCACCGG CGTGGTGGCG
GTTTGTGGCC TGGTGGCCGG CTCCTGGCTG GTCAACATCC GGCAGAAGAG CTTCCGATGG
GAAGGTTTCG GCGACTCCGC CGATACCGCT CGCCACCTGA TCGGCGCCAC GATGATGGGC
ATCGGCGGCG TGACCGCCAT GGGCTGCACC ATCGGACAGG GCCTGAGCGG CCTGTCCACG
CTCGGGCTGA CCAGCCTGGT CGCGGTGGCG GCGATCATTG CCGGGGCGGT CGCCGGATTG
CGTTTCCTGA ACTGGCAGCT GGAGCGAGCC GCATGA
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| Protein sequence | MQASEASNLT AQVLWAVFLL ALLYGAIAER SHFCTMGAVA DVVNFGDWRR LHMWALAAGV
VTIGFNLMVA AGWVSADKTL YGGSRWQWAS ALVGGALFGF GMVLASGCGS KNLVRLGGGN
LKALVVLLVM GLSAWMTLRG LTAMWRVETV DRWAVSLPGS QDLPSLIAAG YGGSTPDVAL
VVGTVVGTAL LAWALWARPG RDAGLLLGGI GIGAVVLAVW WVSGRFGHLA EHPETLEEAF
LGTASRRMEA LSFVTPVAQG LEWLIFYSDQ GRRLSTGVVA VCGLVAGSWL VNIRQKSFRW
EGFGDSADTA RHLIGATMMG IGGVTAMGCT IGQGLSGLST LGLTSLVAVA AIIAGAVAGL
RFLNWQLERA A
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