| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1915 |
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| Symbol | |
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| ID | 6160310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2071687 |
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| End bp | 2075769 |
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| Gene Length | 4083 bp |
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| Protein Length | 1360 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664679 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_001790947 |
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| Protein GI | 171058598 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0662626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGCG CCCGATCGGC GGCGCCACAG CCCTGCGGGA CTCATCGCGT GTCTTCAATT
TCCAGCTCTT CGCCCCAGCA TCTGACGTCT TTCGAGGGCG GCAACGCGCT GTCCGCCTTC
CGCGCCCTGG CCCTGCTGCC ACGGCTGCAG GCCGTCAGCG AACGCATCGC CGGCGTCAGC
GCACGCCATG TGCACTGGGT CTGGAGCGAC AGCGCGCTCG ACCGCGCCGC CCACGACACG
CTGTCGGCGC TGCTGACCTA CGGCGACCCG GCCGAAGCGG TCGATGCCGG CGCGCCCGCC
AGCGTGATCG TCGTGATGCC GCGCCTGGGC ACGCTGTCGC CGTGGGCCTC CAAGGCCACC
GACATCGCCC ACAACTGCGG TCTGGCGATC CACCGGGTCG AACGCGTCAC CGAATTCCGC
ATCAGCCTGA AAAGCGGCCT GCTCGACGCC TTCGTCAAGA AGCCCAAGGC GCTCAGTGCG
GAAGAACTGC AGGCCTGCGC GCTGCTGCTG CACGACCGCA TGACCGAGTC GGTGGCCTTC
GAGCGCGAGG CCGCGCGCCA TCTGTTCGAC GCCCAGCCGG CCGAGCCGCT GGCGCATGTC
GACGTGCTGG GGCAGGGCCG TGAGGCGCTG GTGGTGGCCA ACAAGGACTT CGGCCTGGCC
CTGTCGGACG ACGAGATCGA CTACCTGGTC AACGCCTTCA CCGAGCTCAA GCGCAACCCG
AGCGACGTCG AGCTGATGAT GTTCGCGCAG GCCAACAGCG AACACTGCCG CCACAAGATC
TTCAACGCCG ACTTCACGGT CGACGGCGAG CGCCAGCCGC TGTCGATGTT CGGCATGATC
CGCAACACCG AAAAGCTCGC CCCGCACGCC AGCGTGGTGG CCTACAGCGA CAACGCCTCG
GTGATGCCCG GCGGCCCGAC CGAGCGCTGG CTGCCGCAGG GTTACACCAA CGCGCCGCTC
TACGCCGCGC GCCAGGAAAC CGTGCACGTG CTGATGAAGG TGGAGACGCA CAACCACCCG
ACCGCGATCT CGCCCTTCCC GGGCGCGTCG ACCGGCTCGG GCGGCGAGAT CCGCGACGAG
GGCTCGACCG GCCGCGGCTC CAAGCCCAAG GCCGGCTTGG CCGGCTTCAG CGTCTCGAAC
CTGCACCTGC CCGGCACGGA TGAGCCGTGG GAACGCGCGC CGGTCGGCAA GCCCGAGCAC
ATCGCCAGCC CGCTGCAGAT CATGACCGAG GGTCCGCTGG GCGCCGCGGC CTTCAACAAC
GAGTTCGGCC GGCCGAACCT GGCGGGTTAT TTCCGCGTCT TCGAGCAGGA CGTCGCCGGC
CTGCGGCGCG GCTATCACAA GCCCATCATG ATCGCCGGCG GCCTGGGCAC GATCAGCGAG
GACCAGACCC ACAAGCTGCC CTTCGGCGCC GGCACGCTGT TGATCCAGCT CGGCGGCCCG
GGCATGCGCA TCGGCATGGG CGGCGGCGCG GCCAGCTCGA TGGCGGCGGG CACCAACACC
GCCTCGCTCG ACTTCGATTC GGTGCAGCGT GGCAACCCCG AGATCCAGCG CCGCGCGCAG
GAGGTCATCA ACCATTGCTG GGCGCTGGGC GCGAGCAATC CGGTGGTGGC GATCCATGAC
GTCGGCGCGG GCGGCATCAG CAACGCCTTC CCCGAGCTGG TCGACGGCGC CGGCAAGGGC
GCGACCTTCG ACATCCGCAA GGTGCCGCTC GAAGAAACCG GGCTGGCGCC GAAGGAAATC
TGGTGCAACG AGAGCCAGGA GCGTTACGTG CTGGCGGTCA CGCCCGAGGC GCTGCCGCTG
TTCGACGAGA TGTGCCGGCG TGAGCGCGCG CCCTACGCCG TGGTCGGCGT GGCCACCGAC
GACCGCGAGC TGGTGCTCGA AGAAGGCCCG GGCGGCGAGC GTCCGATCGA CATGCCGATG
GACGTGCTGC TCGGCAAGCC GCCCAAGATG CACCGTGACG TGCAGCGCGT GGCGCGCAGC
GAGCAACCGC TGCAGCTCAC CGGCGTCAAG CTCGACGAGG TGGCTTTGAG CGTGCTGCGC
CACCCGACGG TGGCCAGCAA GCGCTTCCTG ATCACGATCG GCGACCGCAC CGTCGGCGGC
CTGAGCCACC GCGACCAGAT GGTCGGCCCG TGGCAGGTGC CGGTGGCCGA TTGCGCGGTG
ACGCTGGCCG ACTACGCCGG TTTCCGCGGC GAGGCGATGA GCATGGGTGA GCGCACGCCG
CTGGCTGCGC TCGACGCGCC GGCTTCGGGC CGCATGGCGG TGGCCGAGGC CATCACCAAC
CTGCTGGCCG CGCCGATGGA GCTGTCGCGC GTCAAGCTGA GCGCCAACTG GATGGCCGCC
TGCGGCGAGC CGGGCGAGGA TGCGGCGCTG TACGACACCG TCAGGACGGT CGGCATGGAA
CTGTGCCCGG CGCTGGGCAT CGGCATCCCG GTGGGCAAGG ATTCGCTGTC GATGCGCACC
CGCTGGAGCG ATGGCGGTCA TGCGAAGCAG GTGGTCGCGC CGGTGTCGCT GATCGTGTCG
GCGTTTGTCA CGCTCGACGA CGTGCGCGGC ACGCTGACGC CGCAGCTGCG CACCGACACG
CCGGCCGGCA TCGACACCAG CCTGATCCTG ATCGACCTGG GCAACGGCAA GAACCGCATG
GGCGGCTCGA TGCTCGCGCA GGTGCTGGGC CAGTTCGGCA ACGAGGTGCC CGATCTGGAC
GACCCGGAGC GCCTGAAGGC GCTGGTCGCG GCCATCAACC AGTTGCGTGG CGAAGGCAAG
CTGCTGGCCT ATCACGACCG CAGCGACGGT GGCCTCTGGG CCTCGGCCTG CGAGATGGCG
TTTGCCGGCC ATGTCGGCGT GAGCCTGAAC GTGGACATGC TGGTCACCGA AGGTGACGGC
ATCACGGACA GCCGCGCCGA CACCGGCGAC TCGAAGAACT GGGCCGGCCA GGTCGGCGAG
CGCCGCAACG AGCTGACGCT CAAGGCGCTG TTCAACGAGG AGCTGGGCGT TGTCATCCAG
GTGGCCACCG CCGTGCGCAA CGAGGTGCTG CAGACGCTGC GCGAGCATGG CCTGTCCAAG
CACAGCCACG TCATCGGCAA GACCAACGAC CGCGCCGTGG TCGAGGTCTG GCGCGATGCC
AAGAACGTGT TCGCCGCGCC GCTGCAGCAG CTCCATCAGG CCTGGGACGA CGTCAGCTGG
CGCATCGCCG CGCAGCGTGA CAACCCGGCC TGCGCGCACA GCGAACACGC CGCAGCCGGC
GCGCCCGACG ATCGCGGCCT GCACGTGGCG CTGACCTTCG ACCCGACCGA AAACGTCGCC
GCACCGTTCA TCAACCTGAC CCGCCCGAAG GTGGCGATCC TGCGCGAGCA GGGCGTCAAC
TCGCATGTCG AGATGAGCTA TGCGATGGCG CAGGCCGGCT TCGACAGCCA CGACGTGCAC
ATGACCGACC TGCAGACCGG CCGGGCCCGC CTCGACCAGT TCCAGGGTTT CGTGGCCTGC
GGCGGCTTCA GCTACGGCGA CACGCTGGGC GCGGGCGAGG GCTGGGCGCG CTCGGTGCTG
TTCAACCCGA AGCTGGCCGA GCAGTTCGCG GCCTTCTTCG GCCGCACCGA CACCTTCGCG
CTGGGCGTGT GCAACGGCTG CCAGATGATG GCGGCGCTGT CGCCGATCAT CCCGGGCGCC
CAGCACTGGC CCAAGTTCAC GCGCAACAAG AGCGAGCAGT TCGAGGCCCG CCTGAGCCTG
GTCGAGGTGC TGGACAGCCC GTCGATCTTC TTCCGGGGCA TGGCCGGCAG CCGCCTGCCG
ATCGCGGTGG CGCACGGCGA GGGTTTTGCC GATTTCTCGC AGCGCGGCGA TGCCTCGAAA
GTGCAGCGCG CGATGCGCTT CGTCGACCAC GACGGCGCGC CGACCGAGGC CTATCCGCTC
AACCCGAACG GCAGCCCGGA CGGCCTGACC TCGGTCACCA CCGACGACGG CCGTTTCACG
GTGCTGATGC CGCACCCGGA GCGCGTTTTC CGCAACGTGC AGATGAGCTG GACGTCGGGC
GACGTCGACG CGCGCAGCCC GTGGATGCGC ATGTTCGGCA ACGCACGCCG CTGGATCGGC
TGA
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| Protein sequence | MPGARSAAPQ PCGTHRVSSI SSSSPQHLTS FEGGNALSAF RALALLPRLQ AVSERIAGVS
ARHVHWVWSD SALDRAAHDT LSALLTYGDP AEAVDAGAPA SVIVVMPRLG TLSPWASKAT
DIAHNCGLAI HRVERVTEFR ISLKSGLLDA FVKKPKALSA EELQACALLL HDRMTESVAF
EREAARHLFD AQPAEPLAHV DVLGQGREAL VVANKDFGLA LSDDEIDYLV NAFTELKRNP
SDVELMMFAQ ANSEHCRHKI FNADFTVDGE RQPLSMFGMI RNTEKLAPHA SVVAYSDNAS
VMPGGPTERW LPQGYTNAPL YAARQETVHV LMKVETHNHP TAISPFPGAS TGSGGEIRDE
GSTGRGSKPK AGLAGFSVSN LHLPGTDEPW ERAPVGKPEH IASPLQIMTE GPLGAAAFNN
EFGRPNLAGY FRVFEQDVAG LRRGYHKPIM IAGGLGTISE DQTHKLPFGA GTLLIQLGGP
GMRIGMGGGA ASSMAAGTNT ASLDFDSVQR GNPEIQRRAQ EVINHCWALG ASNPVVAIHD
VGAGGISNAF PELVDGAGKG ATFDIRKVPL EETGLAPKEI WCNESQERYV LAVTPEALPL
FDEMCRRERA PYAVVGVATD DRELVLEEGP GGERPIDMPM DVLLGKPPKM HRDVQRVARS
EQPLQLTGVK LDEVALSVLR HPTVASKRFL ITIGDRTVGG LSHRDQMVGP WQVPVADCAV
TLADYAGFRG EAMSMGERTP LAALDAPASG RMAVAEAITN LLAAPMELSR VKLSANWMAA
CGEPGEDAAL YDTVRTVGME LCPALGIGIP VGKDSLSMRT RWSDGGHAKQ VVAPVSLIVS
AFVTLDDVRG TLTPQLRTDT PAGIDTSLIL IDLGNGKNRM GGSMLAQVLG QFGNEVPDLD
DPERLKALVA AINQLRGEGK LLAYHDRSDG GLWASACEMA FAGHVGVSLN VDMLVTEGDG
ITDSRADTGD SKNWAGQVGE RRNELTLKAL FNEELGVVIQ VATAVRNEVL QTLREHGLSK
HSHVIGKTND RAVVEVWRDA KNVFAAPLQQ LHQAWDDVSW RIAAQRDNPA CAHSEHAAAG
APDDRGLHVA LTFDPTENVA APFINLTRPK VAILREQGVN SHVEMSYAMA QAGFDSHDVH
MTDLQTGRAR LDQFQGFVAC GGFSYGDTLG AGEGWARSVL FNPKLAEQFA AFFGRTDTFA
LGVCNGCQMM AALSPIIPGA QHWPKFTRNK SEQFEARLSL VEVLDSPSIF FRGMAGSRLP
IAVAHGEGFA DFSQRGDASK VQRAMRFVDH DGAPTEAYPL NPNGSPDGLT SVTTDDGRFT
VLMPHPERVF RNVQMSWTSG DVDARSPWMR MFGNARRWIG
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