| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1908 |
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| Symbol | |
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| ID | 6160148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2063672 |
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| End bp | 2066128 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664671 |
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| Product | peptidase S45 penicillin amidase |
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| Protein accession | YP_001790940 |
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| Protein GI | 171058591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2366] Protein related to penicillin acylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.284267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAT TGCGCCGCTG GGCCTACGGC CTGCTCGGGC TGGGTCTGCT GCTGTTGCTG
GCCTTGCTGG TCGGCTGGGC GGTCTACCGC CAGCAGGTCC TGCCGATCAC CGACGGGCGT
CTGCACGTGA GCGGCCTGCC TGCCGCTGGT GCGGACGTGC GCATCGAACG CGATGCGCAC
GGCATTCCGA CCATCCGCGC CGCCAGCATC GAAGGCGCGC TGTTCGGCCT CGGCTTCGTG
CACGCCCAGG ATCGGCTGTG GCAGCTCGAG ACCCATCGCC GCATCGGCGC CGGGCGGCTC
GCCGAAGCCT TCGGCCCGCC GGCGCTCGAC AACGACCGGT TCCTGCGTGC GCTCGGCGTG
CGCCGCGCCG CGCAGGCCCA ATGGGAGCAG ACCCGCGGCG AGGCACGCCA GGCGCTGGAG
GCCTATGCCG CCGGCATCAA TGCCTATCTG TCGAAGCACC TGCGCGCGCG GCCGCCCGAA
TTCCTGATCC TCGGCGTGCA GCCCGAACAG TGGCAACCCG TCGACAGCCT GGCCTGGTCG
ATCATGATGG CCTGGGACCT GGGTGGCAAC TGGACCACCG AACTGCTGCG CCTGCGGCTG
GCCCAGCGCA TGAGCGTGGC GCGCATCAAC GAACTGCTGC CGCCATACCC CGGCGAACAG
CCGTTGCCGA CGGCCGATTA CACGACGCTG GCGCAGCAGT GGCAGGTCAT GGGCCCGCTG
GCCGAGCGGA TCATCAGCGC GGCGCCCGAG TCCGGCATCG AAGGCATCGG CTCGAACAAC
TGGGCGGTGT CGGGCCAGCG CAGCAGCAGC GGCAAGCCGC TGCTGGCCAA CGACCCGCAC
CTCAAGCTCA CCGCGCCGGC GCTCTGGTAT TTCGCCCGTC TCGAAGCGCC GGGCCTGCAC
GTGGCCGGCG CGACGATGCC GGGCCTGCCG CTGGTGGTGC TGGGCCAGAA CGAGTCGATC
GCCTGGGGCT TCACCAACAC CGCGCCCGAC GTGCAGGATC TCTACCTCGA GCGCATCCAC
CCGGACGACG CGCAGCAATA CCAGACCCCC GACGGCTGGC AGCGCTTCGA TCGCCACGAC
GAGGTGATCC ACGTCCGCGG CGCTGCCTCG GTGACGATGA CCGCGCGCCA CAGCCGTCAC
GGCCCGGTGA TCTCGGACGC GGCCGGTCCG TCGACCGAAG GCCTGACCGG CGCGGCGGCC
GGGCAGGGCG GGGCGCCCCG ATACGCCATC GCGATGCGGT GGACGGCGCT CGATGCGGAC
GTCGGCACGA TCGAGGCCGG CCTGCGCTTC AATCGCGCCG GCTCGGTGCC TGAATTCATT
GCCGCGGCCG CGCGCTACAG CGCGCCGATG CAGAACATGC TGGTGGCCGA CGCCGTCGGG
AAACACGGCC ACATCGCGCT GGTCGTGCCG GGCAAGCTGC CGGTGCGTTC GCCCGACAAC
GACCTGCGCG GGCTGGTCCC CGCACCGGGC TGGGATGCGC GCTACGACTG GTCGGGCTAT
CTGCCGGCCG CGGACTTGCC GAGCCGGCGT GATCCGCCTG AAGGCTGGCT CGCCACCGCC
AACCAGCGCA TCGTCGGCGC CGGCTATCCG CACCACATCA CCAGCGAATG GATGGCGCCG
TACCGCCAGC AGCGCATCGA ACAGCTGCTG GCCGGGCGGC CCACCCACGA TGTCGAAAGC
TTTGCCGCGA TGCAGCTCGA CCAGCTTTCG CTGGGCGCCA AGGCGCTCGC GGCGGCTTTT
CAGGCTTCGC GCAGCAGTCA TCCGCTGGCT GCGGGCCTGG CGCCCCGGAT CGCTCGTTTC
GATGGGTTGA TGGGTGGCGA CCAGGCCGCG CCGCTGGTGT TCCATGCCTG GGCGAGGGCG
CTGACGGCGC TCGTGTTCGC CGATGAACTC GGGCCGCTGT GGGACAGTCA TTTCGGCGAG
CGCCGCAGTT TTCGGGACGC CCTCGAAGGC GTGCTGGCGC GCGACGATGC CGGGTGGTGC
GATGACAAGA ACACCGCCGC CAGCGAGACC TGCGGCCAGT TGCGCGACCG GGCGCTCGAT
CAGGCCTACG CGCTGCTGCA GGCTCAGCTC GGCGACGACA CCAGCCAGTG GCGCTGGGAC
CGCATGCATG TGGCGCGTTC GGAACACCGA CCCTTCAGCA AGGTCAGCGC ACTGAAACGG
CTGTTCGAGT TGCGCGTGCC TGTGGGTGGC GACGGCCACA GCATCAACGC CACGCGCGTC
GGGCTCAAGC CCGATCCGCA CACCGGCGAA CTGTTCCTGG TCGACCACGC ACCGAGCCTG
CGTGCGGTCT ACGACCTGGC CGATCCGTCG CGCTCGCGTT TCATCCACTC GAGCGGACAG
TCCGGCATCG CGCTGACGCC CGATTACCGC GCCTTCAGCG CGTTGTGGGC GGCAGGAAAA
CAGATTCCGG TCTGGCCGGC CGGCTCGCCC GAGCACGTCT TGACCTTGAC ACGCTGA
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| Protein sequence | MSALRRWAYG LLGLGLLLLL ALLVGWAVYR QQVLPITDGR LHVSGLPAAG ADVRIERDAH
GIPTIRAASI EGALFGLGFV HAQDRLWQLE THRRIGAGRL AEAFGPPALD NDRFLRALGV
RRAAQAQWEQ TRGEARQALE AYAAGINAYL SKHLRARPPE FLILGVQPEQ WQPVDSLAWS
IMMAWDLGGN WTTELLRLRL AQRMSVARIN ELLPPYPGEQ PLPTADYTTL AQQWQVMGPL
AERIISAAPE SGIEGIGSNN WAVSGQRSSS GKPLLANDPH LKLTAPALWY FARLEAPGLH
VAGATMPGLP LVVLGQNESI AWGFTNTAPD VQDLYLERIH PDDAQQYQTP DGWQRFDRHD
EVIHVRGAAS VTMTARHSRH GPVISDAAGP STEGLTGAAA GQGGAPRYAI AMRWTALDAD
VGTIEAGLRF NRAGSVPEFI AAAARYSAPM QNMLVADAVG KHGHIALVVP GKLPVRSPDN
DLRGLVPAPG WDARYDWSGY LPAADLPSRR DPPEGWLATA NQRIVGAGYP HHITSEWMAP
YRQQRIEQLL AGRPTHDVES FAAMQLDQLS LGAKALAAAF QASRSSHPLA AGLAPRIARF
DGLMGGDQAA PLVFHAWARA LTALVFADEL GPLWDSHFGE RRSFRDALEG VLARDDAGWC
DDKNTAASET CGQLRDRALD QAYALLQAQL GDDTSQWRWD RMHVARSEHR PFSKVSALKR
LFELRVPVGG DGHSINATRV GLKPDPHTGE LFLVDHAPSL RAVYDLADPS RSRFIHSSGQ
SGIALTPDYR AFSALWAAGK QIPVWPAGSP EHVLTLTR
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