| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1907 |
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| Symbol | |
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| ID | 6160147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2062581 |
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| End bp | 2063615 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664670 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001790939 |
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| Protein GI | 171058590 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0938828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGAT CGAGCCCCAT GCCCATGAAC ATCATCATTC TGGACGACTA CCAGGACGCG
GTACGCAAAC TCAAGTGTGC CGAGCTTCTG GAGCCCTACA ACCCCAAAGT CTTCACCAAC
ACCGTCAAGG GGATCGGTCA GCTGGCGATC CGCCTCAAGG ATGCCGAGAT CCTGGTGCTG
ATCCGTGAAC GCACGCAGTT CCCGAAGGCC CTGCTCGAGA AGCTGCCGCG CCTTCGACTG
ATCGCCCAGA CCGGACGGGC CGGCTCGCAC ATCGACATCG AAGCCTGCAC GCGACTGGGC
ATCGCGGTGG CCGAAGGCGT GGGTTCGCCG GTCGCGCCGG CCGAGCTGAC CTGGGCCCTG
ATCATGGCGG CGATGCGGCG CCTGCCGCAG TACATCGGCA ACCTCAAGCA TGGCGCGTGG
CAGCAGTCGG GACTGAAGGC GGGTTCGATG CCGCCGAACT TCAGCCTCGG CCTGGTGCTC
AAGGGACGCA CGCTCGGCAT CTGGGGCTAC GGCCGGATCG GCAGGCTCGT GGCCGGCTAC
GGCCTGGCGT TCGGCATGGA CGTGCAGGTC TGGGGCAGCG AAGCCTCCCG GGCAGCGGCG
GCAGCCGACG GGTTTGCCGT GGCCAGCAGC CGCGAGGCCC TGTTCGAGAG CAGCGACGTG
CTGAGCGTCC ACCTGCGGCT GGTCGAAGCC ACCCGCGGCC TGATCGGGCT GGAGGATCTG
TCGCGCATGA AGCCCACGGC CCTGTTCGTG AACACCTCGC GCGCCGAACT GGTCAAGGAC
AACATGCTGG TGACGGCGCT CAACCGCGGG CGTCCGGGCA TGGCTGCGGT CGACGTGTTC
GAGAGCGAGC CGATCCTGCA AGGCCATCCG CTGCTGCGCC TCGAGAACGC GGTCTGCACG
CCGCACGTCG GCTATGTCGA GCTCGACAGC TACGAGCAGT ACTTCAGCGC AGCGTTCCAG
AACATCGTCA ACTACCTCGA CGGCAAGCCG AGCCACATCG TCAATCCCGA CTCGCTGAAG
GCGGCAAGGC CCTGA
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| Protein sequence | MRRSSPMPMN IIILDDYQDA VRKLKCAELL EPYNPKVFTN TVKGIGQLAI RLKDAEILVL
IRERTQFPKA LLEKLPRLRL IAQTGRAGSH IDIEACTRLG IAVAEGVGSP VAPAELTWAL
IMAAMRRLPQ YIGNLKHGAW QQSGLKAGSM PPNFSLGLVL KGRTLGIWGY GRIGRLVAGY
GLAFGMDVQV WGSEASRAAA AADGFAVASS REALFESSDV LSVHLRLVEA TRGLIGLEDL
SRMKPTALFV NTSRAELVKD NMLVTALNRG RPGMAAVDVF ESEPILQGHP LLRLENAVCT
PHVGYVELDS YEQYFSAAFQ NIVNYLDGKP SHIVNPDSLK AARP
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