| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1902 |
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| Symbol | |
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| ID | 6159802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2059237 |
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| End bp | 2059938 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664665 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790934 |
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| Protein GI | 171058585 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0919196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTACAG TCGTGGACAA GACAGGGTCG ATCATCGAGG TCAAGGGCGT CACCAAGCAG
GTGCATGACG CAAGCGGTGT TCTGACGATT CTGCATGAGA TCTCCTTTCG CCTGGCGGCC
CGGGAATCGG TCGCGATCGT GGGCGCCTCG GGCTCCGGCA AGAGCACACT GCTGTCGATC
CTGGCGGGGC TGGACGTGCC CAGCGCGGGC CAGGTTCGGC TGGCGGGCAT CGACCTGTTT
TCGCTCGATG AAGACGCCCG CGCCGCCGTG CGCGGCGAGC ACGTCGGCTT CGTGTTCCAG
AGCTTTCAGC TGATGGGTCA CCTCACGGCG CTCGAGAACG TCATGCTGCC GCTCGAGTTG
CGCGGCGAGC GCGATGCCCG GCGCATGGCC ACCGAGATGC TGCAGCGGGT CGGGCTGGGT
GCGCGGCTCG GACACTTTCC GAAATTGCTG TCGGGCGGTG AACAGCAGCG TGTCGCGCTG
GCGCGGGCCT TCGTGGTGCG GCCGGCCCTG CTGCTGGCCG ACGAGCCCAC CGGCAGCCTC
GACCACGCCA CCGGCGAGGC GGTGATGCAG CTGATGCTCG AACTCAACCG CGAGGTCGGC
ACCACGCTGG TCCTGGTGAC GCACGACGTC GGCATCGCGG CACGTTGCGA TCGGCAGATC
CGCCTGGTCG CGGGGCGCAT GCAGGTCGAG GCCGAGGCCT GA
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| Protein sequence | MGTVVDKTGS IIEVKGVTKQ VHDASGVLTI LHEISFRLAA RESVAIVGAS GSGKSTLLSI
LAGLDVPSAG QVRLAGIDLF SLDEDARAAV RGEHVGFVFQ SFQLMGHLTA LENVMLPLEL
RGERDARRMA TEMLQRVGLG ARLGHFPKLL SGGEQQRVAL ARAFVVRPAL LLADEPTGSL
DHATGEAVMQ LMLELNREVG TTLVLVTHDV GIAARCDRQI RLVAGRMQVE AEA
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