| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1894 |
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| Symbol | |
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| ID | 6160036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2050472 |
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| End bp | 2051887 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664656 |
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| Product | histidine kinase |
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| Protein accession | YP_001790926 |
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| Protein GI | 171058577 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0479288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCCA CCACCTCCAC CACCCTGCAG GCCGGCGCGG TCAAGCGCGC GCCGGCATCG
ACGCCGCTGC GCGGCTTCAC CGCGCTGCTG CGGCGCACCG TGCTGCTGAG CCTGTTCTGG
CGCACCTTCC TGCTGTTGTC GATCATGCTG GGGGTGGGCA TCCTGGGCTG GACCTACGTG
CTGCGCTACT TCGAGCTGGA GCCGCGTGCG GTGCAGGCCG CGCAGCAGAT CGCCAGCTTG
GTGAACCTGT CGCGCGCGGC CTTGCGCTAC ACCGACCAGG TCAACCGCGT GTCGCTGGTG
AAGAACATCG CCGAGCAGGA GGCCGTCAAG CTGCAGCCGC GTGAACCGGG CGACAAGTGG
GAGCCGTTCG AAGTCGACCG CTTCACCCGC ACCATCGGCG CCGAGCTGCG CAGCCGGCTC
GGGCCGCAGA CGGTGGTGGC GAGCACCGTC AACGGCAGCA GCGGGCTGTG GGTGGGTTTC
CTGATCGAGA CCGACCAGTA CTGGCTGCAG GCCGACCCGA ACCGGGTGCA GACCGCCATC
ACCGGCATGA CCTACTTCCT GGTGATGGGC CTGACCTTCC TGGCCACGCT GGTGGTGTCG
GCCTACATCG CCGCCAAGAT CAACCTGCCG CTGCGCGAAC TCAGCTCGGC GGCCAGCCGC
ATCCGCGAGG GCGAGTTCAC CTCGCGCCTG GATGAAGACA CCGCGACGAT GGAGATCCGC
GAGGTCAACC GCGGCTTCAA CCGCATGGCG CGCGAGCTGG CCAAGATCGA GGACGACCGC
GCCGTGATGC TGGCCGGCAT CTCGCACGAC CTGCGCACGC CGCTGGCGCG CATCCGCCTC
GAGACCGAGA TGAGCGTGTC CGACGAGGAG GCGCGCAGCA ACATGGCGAT GGACATCGAC
CAGCTCGACG CCATCATCGA CAAGTTCATG GACTACGCCC GCCCGACCGA GGTCAAGCTC
GCGCCGGTGG TGCTGGCGGT GCTGCTCGAC ACGGTGATCC GCCGCGTCAG CAGCGAGCAC
CTGAAGGTGA CCGCGCGCGT CACCACCGAC GTACGCGTGC TGGGCGACGA GACCGACCTC
GACCGCATCT TCGCCAACCT GTTCGAGAAC GCGCGGCGCT ACGCGCAGTC CGACGACGGC
GTGGCGCATG TCACCGTCAC CTACGCACGT GCCGGCCAGT GGGTGGTGGT GAGCGTGCGC
GACGAGGGGC CGGGCGTCAG CCCCGAGCAG CTCGCGCACC TGACCACGCC GTTCTACCGC
GGCGACAAGG CCCGCACCCA CACCAGCAGC ACCGGCGCCG GGCTCGGGCT GGCGATCGTC
GAGAAGACCG TCACCCGCAT GGGCGGCCAG CTCGAACTCG GCAACGCCCA GGGCGGCGGT
TTCATCGCCT ACGTGAAGCT GCGCCGCGCG CCCTGA
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| Protein sequence | MVSTTSTTLQ AGAVKRAPAS TPLRGFTALL RRTVLLSLFW RTFLLLSIML GVGILGWTYV
LRYFELEPRA VQAAQQIASL VNLSRAALRY TDQVNRVSLV KNIAEQEAVK LQPREPGDKW
EPFEVDRFTR TIGAELRSRL GPQTVVASTV NGSSGLWVGF LIETDQYWLQ ADPNRVQTAI
TGMTYFLVMG LTFLATLVVS AYIAAKINLP LRELSSAASR IREGEFTSRL DEDTATMEIR
EVNRGFNRMA RELAKIEDDR AVMLAGISHD LRTPLARIRL ETEMSVSDEE ARSNMAMDID
QLDAIIDKFM DYARPTEVKL APVVLAVLLD TVIRRVSSEH LKVTARVTTD VRVLGDETDL
DRIFANLFEN ARRYAQSDDG VAHVTVTYAR AGQWVVVSVR DEGPGVSPEQ LAHLTTPFYR
GDKARTHTSS TGAGLGLAIV EKTVTRMGGQ LELGNAQGGG FIAYVKLRRA P
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