Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1892 |
Symbol | |
ID | 6160034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2047534 |
End bp | 2049000 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641664654 |
Product | von Willebrand factor type A (vWA) domain-containing protein |
Protein accession | YP_001790924 |
Protein GI | 171058575 |
COG category | [R] General function prediction only |
COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.141181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCC TCGATGCGCC CTACGACCGG CTCGAAGCCC TGCCGCGTGA ACTCTGGCTG CCGGCGCTGA TCACCTCGGT GGGCGACTCG GCGCAGCGGC TGGCCGATCT GCGCGCCTGG CTCGATGCGC TCGACGCCGG CCGCCTGCCC TCGCCCGAAC ACCACTTTGC CGACGACGAC GCACTCGCGC CGATGCGCGC CGTGATCGGC ACGCTCGAAC TGCCCGGCCT GTGCAAGGGC GTGCCGGCGC TGGCGCAGCA GGTGCTGCGC ACGCTGCTGT GGCATCTCGA CCGCATCGCC GACCTGCAGC CCGCACTCGG CCGCACCGAG GCCATTGCGG CGGCCGCGCA GGGTTTCAGC GCGGAATGGG CGCTCGAATC CACCGGCCTC GAAGAACAGC TCGCGCTGCT GCAGGACCTG GGCGACGTCT CGCAGCTGCG CTGGGACGAA CTGCAAGGCC TGCTCAACTC GCGTGGATGG CAAGAGGCGC AGCGCCTGAG CGCGCTGCTG GCGCACCTGC AGCCGCTGGT CGAGCTGATC CGCGCGCTCG GCCGCACCGA ACACCAGCCG TCGGCGCCGC CGGCCGACAC CGCCGCGCCG CAGGTGCAAT CGCTGCGCCG GCCGATGCGC GAGTGCGAAA CCCACCTGCC CGACGCGCCC GGCGAGGTCA CCGGCATCCG CCAGTCCGAC CGCATCGACC GCATGCTGAG CGCCGAGGCG GTGCAGATCC GCCACCCGGT GCTGCGCAAG CTCTGGCGCG CCCGGCTGGC CGAGGCGCGG CTGCTGACCT ACGAAAGCGA GGCGGTGCTG ATCGAACACG CGCCCGATCC GCAGGCGCGG CCGCAGTTGC AGTCGCAGCC GGTGGCCGCA CCGCTGGCGC GCGGGCCGAT CATCCTGTGC CTGGACACCT CGGGCTCGAT GAAGGGTGCA CCCGAGAAGA TCGCCAAGGC GGTGGTGATC GAGGCGCTGC GCACGGCGCA GCGCGAGCGG CGCGGCTGCA TGCTGGTGGC CTTCGGCGGC CGTGGCGAGA TGCTCAGCCG CGAGCTGCAC GCCGGCGCCG CCGGCCTGCG GGCGCTGCTC GATCTGATCG GCACCGGTTT CGACGGCGGC ACCGACGTGC AGACGCCGAT CGAACATGCC GTCGAGCGGG TGCGCCAGGC GCGCTGGCGC AGCGCCGATC TGCTGATCGT CAGCGACGGC GAATTCGGCT GCGTGCCGCA GACCCTGCTG CAGCTCGATC AGGCCAAGGC CGAACTCGGC CTGCGGGTGC AGGGCATCCT GATCGGCGAC CGCGAAACCA TGGGTCTGCT CGAGACCTGC GACCAGATCC ACTGGCTGCG CGACTGGCGC CGCTTCGAAG GCGAGCAGCC GCAGCGCGAG GGCCACGTGC CGGTGCACAC GCCGAGCCTG ACCGCGCTCT ACTTTCCGAA CGCGCTCAGC GAACGGGCAA GCCGCCACCG CAGCTGA
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Protein sequence | MRTLDAPYDR LEALPRELWL PALITSVGDS AQRLADLRAW LDALDAGRLP SPEHHFADDD ALAPMRAVIG TLELPGLCKG VPALAQQVLR TLLWHLDRIA DLQPALGRTE AIAAAAQGFS AEWALESTGL EEQLALLQDL GDVSQLRWDE LQGLLNSRGW QEAQRLSALL AHLQPLVELI RALGRTEHQP SAPPADTAAP QVQSLRRPMR ECETHLPDAP GEVTGIRQSD RIDRMLSAEA VQIRHPVLRK LWRARLAEAR LLTYESEAVL IEHAPDPQAR PQLQSQPVAA PLARGPIILC LDTSGSMKGA PEKIAKAVVI EALRTAQRER RGCMLVAFGG RGEMLSRELH AGAAGLRALL DLIGTGFDGG TDVQTPIEHA VERVRQARWR SADLLIVSDG EFGCVPQTLL QLDQAKAELG LRVQGILIGD RETMGLLETC DQIHWLRDWR RFEGEQPQRE GHVPVHTPSL TALYFPNALS ERASRHRS
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