| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1888 |
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| Symbol | |
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| ID | 6159915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2040417 |
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| End bp | 2042051 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664650 |
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| Product | phosphoglucomutase |
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| Protein accession | YP_001790920 |
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| Protein GI | 171058571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0033] Phosphoglucomutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.256566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG TCCAGGTTTC CACCCAGCCC ATCGCCGGCC AGCGGCCCGG CACCTCCGGC
CTGCGCAAGA AGGTCTCGGT GTTCCAGCAG CCGCACTACC TCGAGAACTT CGTCCAGGCG
CTGTTCGAGA GCCTCGACGA TCGCGCCGGC CAGACCCTGG TGCTCGGGGG GGACGGCCGC
TTCCACAACC GCGCGGCGGT GCAGACCATC CTGCGCATGG CCGCGGCGCA CGGTTTTGCC
AAGGTGCTGG TCGGGCAGGG CGGCCTGCTG TCGACACCGG CGGCCAGCGC GGTGATCCGC
AAGCGCGGCG CCTACGGCGG CGTGGTGCTG TCGGCCAGCC ACAACCCGGG CGGCCCGGAC
GGCGACTTCG GCATCAAGTA CAACATCGGC AACGGCGGCC CGGCGCCCGA GAAGGTCACC
GAGGCGATCT ACGCCGGCAC GCAGCGCATC ACGCAGTACC CGATCGCCGA CGATGTCGCC
GACATCGACC TCTCGCGCCT GGGCGAGCAG CGCATCGGCG CGATGGTGGT CGAGGTGATC
GATCCGGTGG CCGACCACCT CGAGCTGATG CGCGGGCTGT TCGACTTCGA CGCCATGCGC
GCCTGGTTCG CTGCCGGCAA CCGCATGTGC TACGACGCCA TGTGCGCCGC CGGCGGCCCC
TACGCCCGCG CGGCGCTCGA AGGCGCGCTC GGCGCGCCGG CCGGCACGGT CATCAACGGC
GAGCCGCTGG AGGACTTCGG CGGCCATCAC CCCGATCCCA ACCCGGCCCA CGCCGAGGCA
CTGATCGCGA TCATGTCGGC CGCCGATGCG CCCGATTTCG GTGCAGCCTC CGACGGTGAT
GCCGACCGCA ACATGATCCT CGGCCGACGC TTCGTCGTCA CGCCGTCCGA CAGCCTGGCG
GTGCTGGCGG CCAATGCCGG GCGGGTGCCG GGTTATCGCG ACGGGCTCAA GGGCATCGCG
CGTTCGATGC CGACCTCGCA GGCGGCCGAC CGCGTGGCTG CCGCGCTCGG CATCCCGTGT
TACGAAACCC CGACCGGCTG GAAGTTCTTC GGCAACCTGC TCGACGCCGG CCGCGCCACG
CTGTGTGGCG AGGAGAGCTA CGGCACCGGC TCCGACCACG TGCGTGAAAA GGACGGTCTC
TGGGCGGTGC TGTTCTGGCT CAACCTGCTG GCCGCCACCG GCGAGTCGGT CGAGCAGATC
GTGCGCGCGC ACTGGGCCCG TTTCGGCCGC AACTACTACT CGCGCCACGA CTGGGAGGGC
GTGCCCACCG AGCGCGCCGA TGCGCTGATG GCGGCACTGC GCGCCCGGCT GCCGTCGCTG
GCCGGCGCGC GGTTCGGCGA CCTGCTGATC GAGCAGGCCG ACGACTTCGC GTACACCGAT
CCGGTCGACG GCTCGGTCTC CACCCGCCAG GGCGTGCGGC TCCTCATCGC CGGTGGCTCG
CGGGTGGTGT TCCGCCTGTC GGGCACCGGC ACCGAGGGTG CCACCCTGCG GGTCTACCTC
GAGCGCTACG AAAGCGATCC GGCCCTGCAC GACCTGCCGC CGCAGGACGC GCTGGGCCCG
CTGATCGACC TGGCCGAGCA GATCGCCGGC ATCCGCGCCC ACACCGGCCT CGATGCACCG
GCCGTGATCA CCTGA
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| Protein sequence | MKIVQVSTQP IAGQRPGTSG LRKKVSVFQQ PHYLENFVQA LFESLDDRAG QTLVLGGDGR
FHNRAAVQTI LRMAAAHGFA KVLVGQGGLL STPAASAVIR KRGAYGGVVL SASHNPGGPD
GDFGIKYNIG NGGPAPEKVT EAIYAGTQRI TQYPIADDVA DIDLSRLGEQ RIGAMVVEVI
DPVADHLELM RGLFDFDAMR AWFAAGNRMC YDAMCAAGGP YARAALEGAL GAPAGTVING
EPLEDFGGHH PDPNPAHAEA LIAIMSAADA PDFGAASDGD ADRNMILGRR FVVTPSDSLA
VLAANAGRVP GYRDGLKGIA RSMPTSQAAD RVAAALGIPC YETPTGWKFF GNLLDAGRAT
LCGEESYGTG SDHVREKDGL WAVLFWLNLL AATGESVEQI VRAHWARFGR NYYSRHDWEG
VPTERADALM AALRARLPSL AGARFGDLLI EQADDFAYTD PVDGSVSTRQ GVRLLIAGGS
RVVFRLSGTG TEGATLRVYL ERYESDPALH DLPPQDALGP LIDLAEQIAG IRAHTGLDAP
AVIT
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