| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1884 |
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| Symbol | |
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| ID | 6160294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2034084 |
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| End bp | 2035001 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664646 |
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| Product | band 7 protein |
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| Protein accession | YP_001790916 |
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| Protein GI | 171058567 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0366362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTCG CTTTCGTGAT TCTGGTCATC GCGGCCATCT TCATCGCCCG CTCGGTCAAG
GTCGTGCCCC AGCAGACCGC CTGGGTCATC GAGCGCCTGG GCAAGTACCA CGGCACGCTG
GTGCCGGGCC TGAACTTCCT GGTGCCCTTC GTCGACCGGC TGGCCTACAA GCACTCGCTG
AAGGAAGTGC CGCTCGACGT GCCCAGCCAG GTCTGCATCA CCAAGGACAA CACCCAACTG
CAGGTCGACG GCATCCTGTA TTTCCAGGTC ACCGACCCGC AGCGCGCCAG CTACGGCAGC
TCCAACTACG AGATGGCGAT CACCCAGCTC GCGCAGACCA CGCTGCGCAG CGTGATCGGC
AAGATGGAGC TCGACAAGAC CTTCGAGGAG CGCGACCTGA TCAACAGCGC GGTCGTCAGC
GCGCTCGACG ACGCGGCGCT GACCTGGGGC GTCAAGGTGC TGCGCTACGA GATCAAGGAC
CTGACGCCGC CGGCCGAGAT CCTGCACGCG ATGCAGGCGC AGATCACCGC CGAGCGCGGC
AAGCGTGCGC TGATCGCCGC CTCCGAAGGC CGCCGCCAGG AGCAGATCAA CATCGCCACC
GGCGAGCGCG AGGCCTTCAT CGCCCGCTCC GAGGGCCAGA AGATGGCCGA GATCAACAAG
GCACAGGGCG AGGCCGCCGC CATCAGCGCG GTCGCCGCCG CCACGGCCGA GGCCATCCGG
GTGATCGCCG CAGCGATCGA GCAGCCCGGC GGCACGCAGG CGGTGCAGTT GAAAGTGGCG
GAGAAGGCCG TCGAGGCCTA CGCCCAGCTG GCGCAGACCA ACAACACCAT GATCGTGCCG
GGCAACATGA GCGAGGTGTC GTCCCTGATC GGCACCGCGA TGACGCTGAT GGGCAAGCTG
CCCAAGGGCA CGGCCTGA
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| Protein sequence | MEVAFVILVI AAIFIARSVK VVPQQTAWVI ERLGKYHGTL VPGLNFLVPF VDRLAYKHSL
KEVPLDVPSQ VCITKDNTQL QVDGILYFQV TDPQRASYGS SNYEMAITQL AQTTLRSVIG
KMELDKTFEE RDLINSAVVS ALDDAALTWG VKVLRYEIKD LTPPAEILHA MQAQITAERG
KRALIAASEG RRQEQINIAT GEREAFIARS EGQKMAEINK AQGEAAAISA VAAATAEAIR
VIAAAIEQPG GTQAVQLKVA EKAVEAYAQL AQTNNTMIVP GNMSEVSSLI GTAMTLMGKL
PKGTA
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