| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1876 |
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| Symbol | |
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| ID | 6160376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2027972 |
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| End bp | 2028931 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664638 |
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| Product | folate-binding protein YgfZ |
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| Protein accession | YP_001790908 |
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| Protein GI | 171058559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0515526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCA CCCACCTGCT CCCCAGCGGC GCCTGCCGTC TGCCCTTCTG GGGCGTGATG
CGCGCCAGCG GCGCCGACGC CGTCAGCTTC CTGCACAGCC AGCTGAGCAA CGACGTGACG
CGGCTCGACA CCGGCCACGC CCGCCTGGCG GCCTATTGCA ACGCCCAGGG CCGCATGCTC
GCCAGCCTGC TCTACGCCAA GCGCTCGGCC GAAGAGGTCT GGCTGCTGTG CAGCGCCGAC
CTGCTGCCGG TCACGCTCAA GCGGCTGTCG ATGTTCGTGC TGCGCGCCAA GGCCCGGTTG
AGCGACGCCA GCGGCGAGCT CGCCGTGCTG GGCCTGGCCG GTCAGGCCGG CGCCGACTGG
CTCGGCGCCG ACGCCCCGGC CGGCGCCTGG GACAAGTCCG AGCGCGACGG CGCCATGCAC
GTGCGCCTGC CCGACGTCGC CGGCGTGCCA CGCTGGCTGT GGATCGGCCC CGCAGCGGCG
GCCGAGGCCG TGCTGCAGGC CCTGCCGGTG GTGGCCGAAT CCGACTGGCA ATGGCTCGAC
GTGTCCGCCG GCATCGCCCC GGTGGTGGCC GCCACCAGCG GCCAGTTCGT GCCGCAGATG
CTCAACTACG AGCTGGTCGG CGGGGTCGAT TTCAAGAAGG GCTGCTACCC CGGCCAGGAG
GTGGTGGCGC GCAGCCAGTA CCTGGGCAAG CTCAAGCGCC GGGCCTTCCT GCTGGCCAGC
GACGTGCCCG CGCAACCGGC GCAGGAAGTG TTCTGGAGCG GCGACACCGG CCAGCCTGCC
GGTCAGGTGG CCTGGAGCGC CACCGCGCCC GACGGCAGCC ATCTGGCGCT GGCCGAACTG
AAGATCGGCG TGATCGGCAG CGGCAGCCTG CACCTCGGCT CGGGCCAGGG CCCGCAGTTG
CGCGTGCAGC CCCTGCCCTA CGCGCTGCCC CACGAAGCCA GCAGCGGCGA GGCGGCTTGA
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| Protein sequence | MNSTHLLPSG ACRLPFWGVM RASGADAVSF LHSQLSNDVT RLDTGHARLA AYCNAQGRML
ASLLYAKRSA EEVWLLCSAD LLPVTLKRLS MFVLRAKARL SDASGELAVL GLAGQAGADW
LGADAPAGAW DKSERDGAMH VRLPDVAGVP RWLWIGPAAA AEAVLQALPV VAESDWQWLD
VSAGIAPVVA ATSGQFVPQM LNYELVGGVD FKKGCYPGQE VVARSQYLGK LKRRAFLLAS
DVPAQPAQEV FWSGDTGQPA GQVAWSATAP DGSHLALAEL KIGVIGSGSL HLGSGQGPQL
RVQPLPYALP HEASSGEAA
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