| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1874 |
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| Symbol | |
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| ID | 6160374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2026661 |
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| End bp | 2027620 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664636 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790906 |
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| Protein GI | 171058557 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3332] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0793427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCTGG CCGCCTTTGC CCTGGGCCTG AGCGCGCGGT TTCCGCTGGT GCTGGCGGCC
AATCGCGACG AGTTCCACGC CCGCCCGACC GAAGGCCTGG CCTGGTGGCC GCCCACCAGC
GAAGGCACCG AGATCCTGGC CGGCCGCGAC CTTCAGGCCG GCGGCACCTG GATGGGCCTG
AGCGCCGCAG GCCGGCTGGC CCTGCTCACC AACATCCGCG CACCGAGCCG CCAGCAGGCC
GATGCGCCCT CGCGCGGCAA CATCGTCACG CGCTGGCTCA CCACCTGCCA GCGCACCGAC
CGGTTCTGGA TGCAGACGGC CCTGAGCGGC CACAACGGCT TCAACCTGAT CGCCGCCGAT
TTCAGCCGCG GCGACCTTTA CTGGATGAGC TCGGCCCACG CCAGCCCGCT GCGGCTCGAT
CACGGCCTGT TCGGGCTGTC CAACGGCAGC CTCGACGAAC CGTGGCCCAA GGTCGTGGCG
CTCAAGCAGC AGCTCGGCCT GGCCCTGCAG CGCGCGCAGG ACTGCCCCGC CAGCACGCCC
GACGAACTGG CGTCGAACCT GCTGGCCGCG CTGGGCGACT CCCGCGTGGC GAGCGACGAC
CAGCTGCCCG CCACCGGCAT CGCGCTCGAG CTCGAACGCC AGCTGTCGGC CTGCTTCATC
CGCACGCCCG ATGGCCGCTA CGGCACACGC TGCTCGACGG TGCTGATCAC CGAGCAGCGC
GGCGACGGCC TCGTCACGAC GGTCTACGAA CGCAGCCACG CGATCGCCGG CCGCCCGAGC
CAGCTGCGCC GCGCGACCCT GCACGACTGG CCGCCGCGCC CGGCCGGCGA CGCCCTGCTG
CTGCCGCTGG GTGCGCAGCG GCCGATGCTG GTCCACCACC ACCCGCAGCC GCACCGGTCG
GCGGCCGCGC GTTTCCCGGT GATGCTGTCG GACTTCGACG CCACCGCCGT CCGCGGCTGA
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| Protein sequence | MCLAAFALGL SARFPLVLAA NRDEFHARPT EGLAWWPPTS EGTEILAGRD LQAGGTWMGL
SAAGRLALLT NIRAPSRQQA DAPSRGNIVT RWLTTCQRTD RFWMQTALSG HNGFNLIAAD
FSRGDLYWMS SAHASPLRLD HGLFGLSNGS LDEPWPKVVA LKQQLGLALQ RAQDCPASTP
DELASNLLAA LGDSRVASDD QLPATGIALE LERQLSACFI RTPDGRYGTR CSTVLITEQR
GDGLVTTVYE RSHAIAGRPS QLRRATLHDW PPRPAGDALL LPLGAQRPML VHHHPQPHRS
AAARFPVMLS DFDATAVRG
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