| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1872 |
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| Symbol | |
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| ID | 6162207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2024827 |
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| End bp | 2025792 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641664634 |
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| Product | alpha/beta hydrolase domain-containing protein |
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| Protein accession | YP_001790904 |
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| Protein GI | 171058555 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0657] Esterase/lipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.208365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC TCCCGCCCGC TCCCCTGACC CCCGCGATGC ACGCGCTGCT GCAGCGCATC
CACCGCGCCG ACCGTCCCGC GCTGCACCAC CTCAGCCCGG CCGATGCCCA GCAGCTGTAC
CACGCCGGCG CCGAGGTGCT GGAGCTGCCC CGCGCGCCGC TGGCACGGGT CGAGAACCTG
CAGATCACCG TGGCGCCCGG CGTGGCGCTG CCGGCGCGGC TCTACGCCGG CAGCACGGCG
GCCGGCCTGC CGGTGCTGCT GTACCTGCAC GGCGGCGGTT TCACGATCGG CGGGCTCGAG
ACGCACGACA GCCTGTGTCG CCAGCTGGCC CTGCGCAGCG GCGTGGCGGT GCTGGCGCTC
GATTACCGCC TGGCGCCCGA GCACCGCTTT CCGATCGCGG TCGACGACGC CTGGGGTGCG
CTCGGCTGGC TGGCCCAGCA CGCCGCAGAT CTGGGGCTCG ACCCGCACCG CCTGGCGGTC
GGCGGCGACA GCGCCGGCGG CACGCTTTCG GCGGTGGTCG CCCTGCTGGC GCGCGACCAC
GGCCTGCCGC TGGCCTTGCA GGTGCTGATC ACGCCGGGCA CCACGGCGCA TGCCGACACC
GGCTCGCACC ACACCTACGC GCAGGGCTAC CTGCTCGAGC GCGCCGCGAT CGAGTGGTTC
TTCGACCACT ACATCGACCG CGGCCAGCGC GAGGACTGGC GGTTCGCGCC GCTGCTCGCG
CCCGACCACG ACGCCGTCGC GCCGGCCTGG ATCGGCCTGG CCGAATGCGA TCCGCTGGTC
GACGAGGGCC TGGCCTACGC CGACCGCCTG CGCATGGCCG GCGTGCCAGT GCAGCTCGAG
CTGTGGCGCG GCGTGACGCA CGACTTCATC AAGCTGGGCC GGGCCATCCC CGAAGCCCTG
CAAGCCCAAC AATCGATCGC CGACGCCTTG CGCGCGGCCT TCCAGATGCC CGGAGAACGC
GCATGA
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| Protein sequence | MKPLPPAPLT PAMHALLQRI HRADRPALHH LSPADAQQLY HAGAEVLELP RAPLARVENL
QITVAPGVAL PARLYAGSTA AGLPVLLYLH GGGFTIGGLE THDSLCRQLA LRSGVAVLAL
DYRLAPEHRF PIAVDDAWGA LGWLAQHAAD LGLDPHRLAV GGDSAGGTLS AVVALLARDH
GLPLALQVLI TPGTTAHADT GSHHTYAQGY LLERAAIEWF FDHYIDRGQR EDWRFAPLLA
PDHDAVAPAW IGLAECDPLV DEGLAYADRL RMAGVPVQLE LWRGVTHDFI KLGRAIPEAL
QAQQSIADAL RAAFQMPGER A
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