Gene Lcho_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1864 
Symbol 
ID6162394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp2016874 
End bp2017572 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content72% 
IMG OID641664626 
ProductPAP2 superfamily protein 
Protein accessionYP_001790896 
Protein GI171058547 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.707957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGC TTGCGGCGGC GCGGCAGCCG GCCGGGCGTG CACGCCGTGA TCTGCGGGTC 
ACGCTCGGCG CCGCGGCGGC GCTGCTGCTG TGGGATCTGT CGGGGCTCGA CCTGGCGGTC 
AGCGCCGGGT TCGGCAGCCC GCAGGGTTTT GCCCTGCGCG ACGCCTGGTG GACCCGCGAC 
CTGCTGCACG AGGGCGGCCG CCGCCTGTCG ATGGTGGTGC TGGCCATCGT GCTGATCGAC 
TGCTGGCGGC CGCTGACCCG CGGCCCGGAC CGGCGCACGC GCCTGGCCTG GCTGGGCGCC 
ACGCTGGCGA GCCTGCTCGT GGTGCCCGGC ATCAAGCGGG TCAGCGCCAC CAGCTGCCCG 
TGGGATCTGA GCCTGTTCGG CGGCATGGCG CGTTACGTGT CGCACTGGCA GATCGGCATC 
GGCGACGGCG GCGGCGGCCA CTGCTTTCCG TCCGGGCATG CCGTCTCGGC GTTTGCCTTC 
TTCAGCCTGT ACTTCCTGTG GCGCGACCAC CGTCCGCAAC TCGCACGCAG GCTGCTCGTC 
GCCGTGCTGC TGGTCGGCAG CCTGTACGGC TTGGCCCAGC TGGCCCGTGG CGCGCACTAC 
CCGAGCCACG TGCTGTGGTC GGCCTGGCTG TGCTGGACGC TGTGCCTGGC GTGGGACCAG 
GCGTTTCGCC GCCAGACCCT GGCGAAACTT GATCTGTAA
 
Protein sequence
MTTLAAARQP AGRARRDLRV TLGAAAALLL WDLSGLDLAV SAGFGSPQGF ALRDAWWTRD 
LLHEGGRRLS MVVLAIVLID CWRPLTRGPD RRTRLAWLGA TLASLLVVPG IKRVSATSCP 
WDLSLFGGMA RYVSHWQIGI GDGGGGHCFP SGHAVSAFAF FSLYFLWRDH RPQLARRLLV 
AVLLVGSLYG LAQLARGAHY PSHVLWSAWL CWTLCLAWDQ AFRRQTLAKL DL