| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1853 |
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| Symbol | |
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| ID | 6163375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2004165 |
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| End bp | 2004872 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664615 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790885 |
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| Protein GI | 171058536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAG TCGCCGGCCT GCACGCCTTC TACGACAAGA GCCACGTGCT GCACGGTGTC
GACCTGACGG TGGGCGAGGG CGAGATCGTC AGCCTGCTGG GCCGCAACGG CGCCGGGCGT
TCGACCACCG TCAAGGCCGT CATGGGGCTG GTCGAGGCAC GCGGCTCGGT GCGCTGGCAG
GGCCGGCAGC TGCTCGGCCG CCGGGCCTTC GAGATCGCCC GCCTCGGCGT CGGCTACGTG
CCCGAGAACC GTGAGATCTT CGCGCGCCTG ACGGTGCACC AGAACCTGCT GCTGGGCCAA
AAGAGCGGCC GCCAGCCGGG CCGCCGGCCG GGCGGCTGGT CGTTCGACGA CGTGTACACG
CGGTTCCCGC ACCTGGCGGC GCGCCAGCAC AGCCCCGCCG GCGTGCTGTC GGGTGGCGAG
CAGCAGATGC TCACGCTGTG CCGCACGCTG ATGGGCGACC CCGCGCTGAT CCTGATCGAC
GAGCCGACCG AAGGCCTGGC GCCGCAGCTG GTCGAGCAGG TGGCGGCCCT GCTGCTGGCG
CTGCGCGAGC GCGGCACGGC GGTGCTGCTG GTCGAGCAGA AGTTGACGCT CGCGCTGCAG
GTGTCGGCGC GCTGCCTGGT GATGGGGCAC GGCCGGGTGG TGTTTGCCGG CACGCCGGCC
GACCTGCGCG CGCAGGCCGG CGTGCGCCGG GAGTGGCTCG AGGTCTGA
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| Protein sequence | MLEVAGLHAF YDKSHVLHGV DLTVGEGEIV SLLGRNGAGR STTVKAVMGL VEARGSVRWQ
GRQLLGRRAF EIARLGVGYV PENREIFARL TVHQNLLLGQ KSGRQPGRRP GGWSFDDVYT
RFPHLAARQH SPAGVLSGGE QQMLTLCRTL MGDPALILID EPTEGLAPQL VEQVAALLLA
LRERGTAVLL VEQKLTLALQ VSARCLVMGH GRVVFAGTPA DLRAQAGVRR EWLEV
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