| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1848 |
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| Symbol | |
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| ID | 6161802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1998368 |
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| End bp | 1999597 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664610 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001790880 |
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| Protein GI | 171058531 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCTGG CCGGCTGTGC CGCCGCACCC TCGACGGCAC CGCAGGCACC GGCCGAGTCG
AGCGTCGGCA CCCCACCGAC GCCGATCCAG GCCGATGACA CCGCGCTGCA GCAGGATTTC
AGCCGCTGGA TCCTGAGCAT GCGCGACACG GCCCGTACCG CCGGCATCGA CGAGGCCACG
CTGGCGGTCG CGTTCGACGG CATCCGCTAC CTGCCGCGCG TCGTCGAATC GGATCGCTCG
CAGCCCGAAT TCACCCGCAC GGTCTGGGAT TACCTCGATC GCGCCGTGTC ACCGCAGCGC
ATCGCGCTGG GCCAGGACAA GCTGCAGCAG GTCCGCCCCG AAGCCGACGC CGCGGCCGCC
CGCTACGGCG TGCCGGCCGC CATCGTGGTC GCCATCTGGG GCGTGGAAAG CAACTACGGC
GGCAACTTCG GCGACATCCC GACCATCGAC GCGCTGGCCA CGCTCGGCTT CGAGGGCCGG
CGCCAGACCT GGGCGCGTGA CCAGTTGCTC GCTGCGCTGA AGATCCTGCA GAACGGCGAC
ATCGACCGCG CGCACATGAT CGGCTCCTGG GCCGGCGCGA TGGGCCAGAC GCAGTTCCTG
CCATCGGTGT TCCTGAACAC CGCCGTCGAT GCGGACGGCG ACGGGCGGCG CGACATCTGG
GGCAGCATGG CCGACGTCAC CGCGTCGACG GCGAACTTCC TGGCCCGCGC GGGCTGGCAG
GCGCAGCAAC CGTGGGGCGC CGAGGTCCGC TTGCCGCCGG CGTTCGACAT CGGCCGTGCC
GATGCCGCGC TGCGGCAATC CACCGCGCAA TGGGCCGCCG AGGGCGTGCA GAGCGTGGAC
GGCGCGCCGC TGCCCGAGCT GGCCGATGCG GCCATCCTGC TGCCCGCGGG CGCACGCGGG
CCGGCCTTCC TGATCGGGCC CAACTTCCGC GCCATCCTGC GCTACAACAA TTCGACCAGC
TATGCGCTCG CGGTCGCCCT GCTGGCGCAG CGCCTGGCCG GCGGCCCCGG CGTGCAGGCG
CCCTGGCCGC GTGATCTGGC GGCGCTCACG CGCAGCCAGT TGCTTGCGTT GCAGACGGCG
TTGAACGAGC GCGGCTTTGA CAGCGGCACG CCCGACGGGG TGATGGGGCC GGCCACGCGC
CAGGGGTTGC TGCGCTATCA GCGCAGCGTC GGGCTGCCTG CGGACGGGTA TCCCACTGTG
GAGTTGCTGG AGCGGTTGCT GGAGCGGTAG
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| Protein sequence | MALAGCAAAP STAPQAPAES SVGTPPTPIQ ADDTALQQDF SRWILSMRDT ARTAGIDEAT
LAVAFDGIRY LPRVVESDRS QPEFTRTVWD YLDRAVSPQR IALGQDKLQQ VRPEADAAAA
RYGVPAAIVV AIWGVESNYG GNFGDIPTID ALATLGFEGR RQTWARDQLL AALKILQNGD
IDRAHMIGSW AGAMGQTQFL PSVFLNTAVD ADGDGRRDIW GSMADVTAST ANFLARAGWQ
AQQPWGAEVR LPPAFDIGRA DAALRQSTAQ WAAEGVQSVD GAPLPELADA AILLPAGARG
PAFLIGPNFR AILRYNNSTS YALAVALLAQ RLAGGPGVQA PWPRDLAALT RSQLLALQTA
LNERGFDSGT PDGVMGPATR QGLLRYQRSV GLPADGYPTV ELLERLLER
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