Gene Lcho_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1847 
Symbol 
ID6161801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1997711 
End bp1998319 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID641664609 
Producthypothetical protein 
Protein accessionYP_001790879 
Protein GI171058530 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTGC GCCTCCTCGA TCTCTTCGGC GTCGCCGTCT TCGCCATCAG CGGTGCACTC 
GCCGGCATCG CTGCGCAGCT CGATCTGCTG GGCATCCTCG TGCTGGCATC CGTCACCGCG 
GTCGGAGGCG GCACGATTCG CGACCTGCTC CTGAGTCGAC ACCCCATCTT CTGGATCGAA 
GATCCCGGGC CTCTTTTTTC CATCGCCTGC GCAACCGCGC TGACCCTGCT CTGGGTTCAC 
TTCTTTCCGA TCCCGACGAG CGCGCTGCTC ATCGCCGATG CACTCGGTCT GGCCTTGTTT 
GCGATGTCCG GCGCCCGGAT CGCCGAAAGC GCCGGGTGTC ACCCGCTCGT GGTCATTCTC 
ATGGGCACGC TCACAGGTGC CGGCGGCGGA GTTGTCCGCG ATCTGCTGTC GGCCAGGATC 
CCGCTGATTC TTCGCCAGGA CATCTATGCC TCGGCAGCCA TCGCCGGCAT CGCCATCTAT 
CTGCTCATGC GAGCGGCCAA GGTGCCCGCG GGGTTCGCGC TGGCGGCGGG TTTCGTCGCG 
GTCGCGGCCA CGCGCCTGGC GGCGATCGCC TTCGACCTTC GGCTTCCCAC GTTTGCGCTG 
CCGCAGTGA
 
Protein sequence
MLLRLLDLFG VAVFAISGAL AGIAAQLDLL GILVLASVTA VGGGTIRDLL LSRHPIFWIE 
DPGPLFSIAC ATALTLLWVH FFPIPTSALL IADALGLALF AMSGARIAES AGCHPLVVIL 
MGTLTGAGGG VVRDLLSARI PLILRQDIYA SAAIAGIAIY LLMRAAKVPA GFALAAGFVA 
VAATRLAAIA FDLRLPTFAL PQ