Gene Lcho_1840 details

Gene Information

• Locus tag: Lcho_1840
• ID: 6160608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 1989637
• End bp: 1990275
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641664602
• Product: intracellular septation protein A
• Protein accession: YP_001790872
• Protein GI: 171058523
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG2917] Intracellular septation protein A
• TIGRFAM ID: [TIGR00997] intracellular septation protein A

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 46
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGCTGT TTCTCGATTT CCTCCCGATC ATCCTGTTCT TCCTGACCTT CAAGGTCGCC 
GAAGGACGCG CCGAAGAGGC CGCCGCCTTT GCCACCGAAC ACCTCGGCGC GCTCGTCTCC 
GGCGGCGTGG TCGGCGCGGC CGAAGCGCCG GTGCTGCTGG CCACGGTGGT GGTGATCCTG 
GCCACGCTGG CGCAGGTGCT GTACCTGAAA CTGCGCGGCC AGAAGGTCGA CACCATGCTG 
TGGGTGAGCC TCGGGCTCGT CACGGTGATG GGCGGCGCCA CGATCTGGTT CCACAGCGAG 
ACCTTCATCA AGTGGAAACC GAGCGTGCTG TACTGGGTGA TGTCGGCGGC ATTCCTGCTC 
GCACCCATCG TGGCCGGCAA GGATCTGCTG CGCGCCATGC TGGGCGGCCA GATCGAACTG 
CCTGCCTTTG CCTGGAAGAA GCTGAACCTG GCCTGGGCGG CGTTCTTCGC CGGCATGGGC 
GTGCTCAACA TCTGGGTCGC CTACAACTTC AGCACCAGCA CCTGGGCCAC CTTCAAGGCC 
TTCGGCGGCA TGGGGCTGAT GTTCGTCTTC ATGCTGGCGC AGGGCCTGTA CATGCACCGG 
CACATGAAGG TCGACGGCAT CAAGGCGGAC GAATCATGA 

 

Protein sequence

MKLFLDFLPI ILFFLTFKVA EGRAEEAAAF ATEHLGALVS GGVVGAAEAP VLLATVVVIL 
ATLAQVLYLK LRGQKVDTML WVSLGLVTVM GGATIWFHSE TFIKWKPSVL YWVMSAAFLL 
APIVAGKDLL RAMLGGQIEL PAFAWKKLNL AWAAFFAGMG VLNIWVAYNF STSTWATFKA 
FGGMGLMFVF MLAQGLYMHR HMKVDGIKAD ES