| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1838 |
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| Symbol | |
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| ID | 6160606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1988376 |
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| End bp | 1989203 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641664600 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001790870 |
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| Protein GI | 171058521 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT CATCGTTTGC CCTGCGCACC GTCGTGCGCG CCGCCTCTGC CGCAGCGCTG
ACCGTGGCCC TGCTGCCCAC GATCGCCCAG GCTCAGAACA TCGCCATCGT CAATGGCAAG
GGCGTGCCGA CCGCGCGTTT CGATTCGTTC ATGACGCAGG TCACCAAGCA GGGGAACCAG
CCGCGCACCG CCGAGCTGGA GCGCCAGGTC AAGGACGAGC TGGTGCTGCG CGAGATCTTC
GTGCAGGAAG CCGAAAAGCG CGGCCTGCAG AAGAACAGCG AGTACCGCAC CCAGATGGAG
ATCGCGCGCC AGAGCCTGCT GATCCGCGAG CTGTTCAACG AGTACCAGAA GAAGAACCCG
GTCACCGACG CCGAGATCAA GGCCGAGTAC GACAAGGTCA AGTCGGGCGC GGGCGAGAAG
GAATACCACG CCAAGCACAT CCTGGTCGAG AAGGAAGACG AAGCCAAGGC GCTGATCGCC
GAGCTCAAGG GCGGCGCCAA GTTCGACGAG CTGGCCAAGA AGGCGTCGAA GGATCCGGGC
TCGGCCCAGA ACGGCGGCGA CCTCGACTGG GCCGCGCCGG CCAACTACGT GCCCGAGTTC
TCGCAGGCGA TGGTCAAGCT CGAAAAGGGC AAGTACACCG AGACCGCGGT GAAGAGCCAG
TTCGGCTACC ACATCATCCT GCTCGACGAC GTGCGTGAAG CGCAGTTCCC GCCGCTGGAA
GAAGTCAAGG CGCAGCTCGA GCAACGCCTG GCGCAGCAGA AGATGGGCAA GTACCGCGAA
GAACTGCGGT CCAAGGCCAA GACCGACTAC AAGTTCACCG GCCAGTGA
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| Protein sequence | MKKSSFALRT VVRAASAAAL TVALLPTIAQ AQNIAIVNGK GVPTARFDSF MTQVTKQGNQ
PRTAELERQV KDELVLREIF VQEAEKRGLQ KNSEYRTQME IARQSLLIRE LFNEYQKKNP
VTDAEIKAEY DKVKSGAGEK EYHAKHILVE KEDEAKALIA ELKGGAKFDE LAKKASKDPG
SAQNGGDLDW AAPANYVPEF SQAMVKLEKG KYTETAVKSQ FGYHIILLDD VREAQFPPLE
EVKAQLEQRL AQQKMGKYRE ELRSKAKTDY KFTGQ
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