Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1835 |
Symbol | |
ID | 6161323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1984590 |
End bp | 1987004 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641664597 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001790867 |
Protein GI | 171058518 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAA ACATCGCCAC CCGGGCGGTA GACCCCCAGG CCATCGAACT GCAGGTGCTG GGCATGACAT GCGCTTCGTG CGTGTCGCGG GTCGAGAAGA CCTTGCGTGC GGTGGCCGGC GTGCGCCAGG CCAGCGTCAA CCTCGCCACC GAAACGGCCA CCGTCTCGGG CGACCCCGGC CTCGACACGC AGGCGCTGGC CGCTGCGGTC CGAAAGGCCG GCTACGACGT CGGCACGCGC AGCTTCAAGC TGCAGATCGA GGGCATGACC TGCGCGTCGT GCTCCGGCCG GGTCGAGAAG GCCTTGCGCA AGGTGCCGGG CGTGACGTCG GCGGTGGTCA ATCTGGCCAC CGAGCAGGCC AGCGTCGAGG GTTTGTCGGG CCTGTCGGCC GCGGTGCTGA AGGCTGCGGT CGAGCGCGCC GGTTATGCCG TGCGCGATGC CAGCGCGCTG GCCGAGCCGG CCGCGGCATC GCGCCTGCCG GCGTGGTGGC CGGTGGCGGC GGGTGCGGCG TTGACGCTGC CGCTGGTCGC GCCGATGCTG CTGGCGCTGT TGGGCATCGA CGCCATGCTG CCCGGCTGGC TGCAATTGCT GCTGGCCACG CCGGTGCAGT TCTGGCTGGG TGCGCGCTTC TACAAGGCCG GCGCCAAGGC GCTGCTGGCG CGCAGCGGCA ACATGGACCT GCTGGTGGCG CTGGGCACGT CGGCGGCCTA CGGGCTGTCG GTCTATCTGC TGCTGCGCCA CGCCGATCAC GGCATGCCGC ACCTGTATTT CGAGGCCTCG GCGGCGGTCA TCACGCTGGT GCTGCTCGGC AAGTGGCTCG AAACCCGCGC CAAGCGCCAG ACCACCGACG CGATCCGCTC GCTGCAGGCG CTGCGGCCGG TGACGGCGCG GGTGCTGCGC GCGGGCGTCG AGATCGAGAC GCCGATCGAC CAGGTGGTGG TCGGCGACGC GGTGCGGGTG CGCCCCGGCG AGCGCGTGCC GGTCGACGCC GAGGTGATCG ACGGCAGCAG CCAACTCGAC GAGTCGCTGA TCACCGGCGA GAGCCTGCCG GTGGCCAAGG GCATCGGCGA GCGCGTCACC GGCGGCTCGA TCAACGGCGA GGGCGCGCTG ACCGTGCGCA CGCTGGCGGT GGGCGCAGAG ACCACGCTGG CACGCATCAT CCGGCTGGTC GAATCGGCGC AGGCCGGCAA GGCGCCGATC CAGCGGCTGG TCGATCAGGT CAGCGCGGTG TTCGTGCCGG TGGTGCTGGG GATCGCGCTG CTGACGTGGG TGGGCTGGGT GCTGGCCACG GGCGACTGGG AGGGCGCGCT GGTCAATGCG GTGGCGGTGC TGGTGATCGC CTGCCCGTGC GCGCTGGGGC TGGCGACGCC GACCGCCATC ATGGTCGGCA CCGGCGCGGC GGCGCGCCAC GGCATCCTGA TCAAGGACGC CCAGGCGCTC GAACTCGCGC ACGCCGTGCA GGTGGTCGCC TTCGACAAGA CCGGCACGCT GACCGAAGGC CGGCCGACGC TGGTCGACGC GCTGCCCGCC GGTGATCTGG GCCGCGCCGG CCTGCTGCGG CTGGCCGCCG GCATGCAGCG CGCGAGCGAA CACCCGCTCG CCCGTGCGGT GACGCAAGCC GCCGAGGCCG AGCGGGTCGA GCCGGCCGAC GTCAGCGACG TCAAGGCCTT GCCCGGCCGC GGCCTGCAGG CGCGCCTGGG TGAAGACACC TTGCTGCTCG GCAGCAGCCG TCTGCTGGCC GAACAGGGCC TGCAGCCCGG CGCACTGGCC GACGCGGCGA TCCATCTCGA AGCTCAGGGT CGTACGCTCT CATGGTTGAT CCGCAGCGTC GCGGGACAGC CTGAACTGCT CGGCCTGCTG GCGTTTGGCG ACGTCGTCAA ACCCGCGGCC CAGGCGGCGG TGTCGCGGCT GCGCCAGCTC GGCGTGACCT GCGTGATGCT GACCGGCGAC AACCTCGGCA GCGCGCAGGC GGTGGGTCAG CAGCTCGGTA TCGACGAGGT GCGCGCCCAG GTGCTGCCGG CCGACAAGGC GAAGGCGGTC GAGGCGCTCA AGGTCGGCGG ACGGCGCGTC GCGATGGTGG GCGACGGCAT CAATGACGCC CCGGCGTTGG CGGCCGCCGA CGTCGGCATC GCGATGGCCA CCGGCACCGA CGTGGCGATG GAGACCGCCG GCATCACGCT GATGCGCGGC GACCCGCGGC TGGTTTCCGA TGCGATCGAC ATCTCGCGGC GCACCTGGCG CAAGATCCGC CAGAACCTGT TCTGGGCCTT CGCGTACAAC GTGGTCGGCA TCCCGCTGGC GGCGATGGGC CTGCTCAACC CGGTGATCGC CGGTGCGGCG ATGGCCTTGA GCAGCGTCAG CGTGGTCGGC AACGCGCTGC TGCTGCGACG CTGGCGCCCG GCGCGGCGCG CCTGA
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Protein sequence | MNANIATRAV DPQAIELQVL GMTCASCVSR VEKTLRAVAG VRQASVNLAT ETATVSGDPG LDTQALAAAV RKAGYDVGTR SFKLQIEGMT CASCSGRVEK ALRKVPGVTS AVVNLATEQA SVEGLSGLSA AVLKAAVERA GYAVRDASAL AEPAAASRLP AWWPVAAGAA LTLPLVAPML LALLGIDAML PGWLQLLLAT PVQFWLGARF YKAGAKALLA RSGNMDLLVA LGTSAAYGLS VYLLLRHADH GMPHLYFEAS AAVITLVLLG KWLETRAKRQ TTDAIRSLQA LRPVTARVLR AGVEIETPID QVVVGDAVRV RPGERVPVDA EVIDGSSQLD ESLITGESLP VAKGIGERVT GGSINGEGAL TVRTLAVGAE TTLARIIRLV ESAQAGKAPI QRLVDQVSAV FVPVVLGIAL LTWVGWVLAT GDWEGALVNA VAVLVIACPC ALGLATPTAI MVGTGAAARH GILIKDAQAL ELAHAVQVVA FDKTGTLTEG RPTLVDALPA GDLGRAGLLR LAAGMQRASE HPLARAVTQA AEAERVEPAD VSDVKALPGR GLQARLGEDT LLLGSSRLLA EQGLQPGALA DAAIHLEAQG RTLSWLIRSV AGQPELLGLL AFGDVVKPAA QAAVSRLRQL GVTCVMLTGD NLGSAQAVGQ QLGIDEVRAQ VLPADKAKAV EALKVGGRRV AMVGDGINDA PALAAADVGI AMATGTDVAM ETAGITLMRG DPRLVSDAID ISRRTWRKIR QNLFWAFAYN VVGIPLAAMG LLNPVIAGAA MALSSVSVVG NALLLRRWRP ARRA
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